Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00334 ATGGCTGCTGCCTTGGAGTGTTGGTCTAGCAGGGCGAGCACAGATGAGGACATGGTCGAGCAGGTTTTGATGAGGACTAATGACAGATCCGAGGGCCAACTGTCGGAGACTTCTTCTGGCGCAGGAGCTAAGGAATCTTCGGCGATGCAGAAGAAGTTTCAGAAGCTGAGTCGGAACGTGTCTGAGGCTATAGCTTCGCTCAAGAACTCACTCAATCTGGACTCAGCTCGCGACCCACCTCCTTCTAAGATTGATACTAATTCTCGGAAAGTTGTTTGGGGCAGCGTCGTACGGAATCTCACGCAACTTTATCCTGGTAGCCAGCTACCGGAGAAGCTCATGTCCAACATTCGCAAGCATTACGATTCGTTGCCTCTCAGTTATGCTCAAGCAGGGTTTGATATGAAAGATGTGTTTATTCACATCAAATTGATAGAGCAGGCATCAGCAGAAGACCAGCCTGCAATTTTAATTCAGGAAGAGATTGATAATGAGATTCAAGGGTCTTTATTCAAGCTGACATTTGCCTGTAACTCTCCAATTTCATGGCCAGCAATGTCCAGTGCACTGGATAGTTCATCCATTTGCTGCAAGAAGATACAGATCTTTGAGAAGAAAGGATTCACCCTTGGGattgttcttcttcttattcaaTCTGGGCAAGATAAATTAGTACGAACCCGAGTCGAAAATGCTCTGAAATTTGCTATGAAGAAGCCCAAATCCAGTGCTGTGAAGCTGCCGTTTGGGCTTTGTGGATGTCAAGAAGAGAACTCCAAGGGGAGAGAGCTGggagaaattgaagaagatGGTGGCGATGCTTATTATGGAAATGGGTTTGAAAGTTCTTGTCAAAAGGTTCAGCTTCAGATGCCCCTCCCCACCTCATCTTTTCTTGTAACAGTAGATGAATGGCAAACAATTCAGAAAGGTGGAGATGAGATAGAAAAGTGGCTATTGAACTCAGAAAATCTCGAGTTCATAGAGCAGATTGGTCCCAATTCATATAAGGGGGTCTATATGGGGAAAAGGGTTGGAATTGAGAAGCTTAAAGGATGTGATAAAGGAAATTCTTATGAGTTTGAGCTCCGTAAAGATCTGTTGCAACTGATGACTTGTGGGCATAAAAACATTCTGCAATTCTATGGTGTTTGTGTAGATGAGAATCATGGGTTATGTGTACTGACAAAGTGCATGGAAGGTGGATCAGTTCATGACATAATGctaaagaacaagaagatTCAGACTAAGGATATTATAAGGCTTGCAGTTGATGTAGCTGAAGGGATCAAGTTTATGAATGATCATGATGTTTCATACAGAGATCTCAATACACAGCGGATTCTATTGGATCGACACGGGAATGCTTGCTTGGGAGATATGGGTATTGTCACAGCATGCAAGAGTGTTGGAGAGGCAATGGAGTATGAAACTGATGGTTATCGGTGGCTAGCTCCAGAGATAATTGCAGGTGACCCAGAGAGTGTTACGGAGACATGGATGAGTAATGTCTACAGTTTTGGAATGGTAATTTGGGAGATGGTTACTGGTGAGGCAGCCTATGCTTCATATTCACCTGTGCAGGCAGCAGTTGGCATTGCTGCTTGTGGCCTTAGACCTGAGATCCCCAAGGACTGCCCACAAATTCTCAAATCTCTGATGACTAAGTGCTGGAACAACAACCCTTCAAAGCGCCCACAATTCTCTGaaattttatccattttgcTGCGACCGAACAACAATCGGTA 1748 0.4302 MAAALECWSSRASTDEDMVEQVLMRTNDRSEGQLSETSSGAGAKESSAMQKKFQKLSRNVSEAIASLKNSLNLDSARDPPPSKIDTNSRKVVWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAGFDMKDVFIHIKLIEQASAEDQPAILIQEEIDNEIQGSLFKLTFACNSPISWPAMSSALDSSSICCKKIQIFEKKGFTLGIVLLLIQSGQDKLVRTRVENALKFAMKKPKSSAVKLPFGLCGCQEENSKGRELGEIEEDGGDAYYGNGFESSCQKVQLQMPLPTSSFLVTVDEWQTIQKGGDEIEKWLLNSENLEFIEQIGPNSYKGVYMGKRVGIEKLKGCDKGNSYEFELRKDLLQLMTCGHKNILQFYGVCVDENHGLCVLTKCMEGGSVHDIMLKNKKIQTKDIIRLAVDVAEGIKFMNDHDVSYRDLNTQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYASYSPVQAAVGIAACGLRPEIPKDCPQILKSLMTKCWNNNPSKRPQFSEILSILLRPNNNR 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00334 582 MobiDBLite consensus disorder prediction 25 52 - -
Bva12g00334 582 Pfam Protein tyrosine and serine/threonine kinase 360 574 IPR001245 GO:0004672|GO:0006468
Bva12g00334 582 ProSiteProfiles Protein kinase domain profile. 325 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00334 582 Gene3D Transferase(Phosphotransferase) domain 1 318 579 - -
Bva12g00334 582 MobiDBLite consensus disorder prediction 26 52 - -
Bva12g00334 582 SUPERFAMILY Protein kinase-like (PK-like) 308 575 IPR011009 -
Bva12g00334 582 PANTHER SERINE-THREONINE PROTEIN KINASE 1 579 - -
Bva12g00334 582 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00334 Bva-Chr12 5401457 5406056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00334 308 575 MAP Kinase Kinase Kinase AT2G17700 33.818 1.57e-51 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Bva12g00334 PK_Tyr_Ser-Thr 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00334 - - vri:117916813 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00334 12 5401457 5406056 Bva12g00334 12 5401457 5406056 ECH