Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00329 ATGGCAATTGCAAATAAGGAGAGAGATGGATCATCACAATATACACCTCTGTTGCTGGATGACAATCTGCATGGTGCAACTGAAGTGGGAGCTGGTGAAGATGTCAGCAATAACAAGAATCAAACCTCTTTCCTCAAGACCTgaaGTGGAATAATTTCAATCCCATTTGCCCTAGCTTCTGGAGGATGGCTAAGCTTGATCCTTCTGTTCATGGTCTCCATGGCTGCCCATTATTCAGGCAAAATGATTCAGAAATGCATGGACTTGAATTCCAATATCAAACTCTTCCATGACTTGGGGCAACAAGCATTTGGAAACAAGGGAagaatctttattttaattgtcatGAACTGTGAACTCTACATGGTTGTAACAGGCTACTTGATTCTTGAAGGGGACAACATGAGCAAAATTTGGCCAAATCTGAAAATGGATATTGCAGGGCTAACCCTAAATGGCACACAACTGTTTATCATTATTACTGCTCTCATTATTTTGCCTCTATTGTGGTTGGATAACTTGGTCTACCTTTCTTATGTGTCTGCAACTGGGGCTTCTGCATCAGTTATCTTCTTGTGCGCATTGTTGTGGTATGGTGCATTTGATGGGCCAGGGTTCACTCAAGAGGGAACTGTTATCAACTGGAGTGGAATTCCTTCTGCTGTTAGCTTGTATGCATTTTGTTATAGTGCCCACCCAGTTTTTCCAAATCTCTACCCTTCCATGAGAAACAAGAAGCAATTTCCCAATgTCTTGCTTTTATCCTTCATCTTGTGCTCCTTCATATATGCAGCAACAGCTATTGCTGGTTATCTAATGTTTGGCTCAGAGGTTGAATCAGAGATAACTCTAAACCTCTCATCAAGCAAAGTGAGTGCAAAAGTGGCTATATACATCATCACGGTGAGTCCCATAGCCAAATATCCAATCACAATTACACCAGTTTTGGATTCTATAAAGAATGCAATTCCAGAAAACTACAACAAAAGAATCACACaccttgctttgagcacttgTGTGCTCATCAGCACAGTTGCTGTAGCTCTAGGGGTTTCCTTTTTTGCTTATCTCACGTCACTTGGTGGAGCACTGTGCAGTGTCACATGTGCACTCCTGGTGCCATGTGTGTGCTATCTGAAGATGACAAATGCTTTCAGAAAGGTTAAAGTGGAAAGTGTTATTAATTGGGGGATAATAGTATTTGGGATTGCAATTTTGATAGCAGGCACTTATGCATCTCTTGTAGAGATTATGGAAGCACATTg 1265 0.3984 MAIANKERDGSSQYTPLLLDDNLHGATEVGAGEDVSNNKNQTSFLKTSGIISIPFALASGGWLSLILLFMVSMAAHYSGKMIQKCMDLNSNIKLFHDLGQQAFGNKGRIFILIVMNCELYMVVTGYLILEGDNMSKIWPNLKMDIAGLTLNGTQLFIIITALIILPLLWLDNLVYLSYVSATGASASVIFLCALLWYGAFDGPGFTQEGTVINWSGIPSAVSLYAFCYSAHPVFPNLYPSMRNKKQFPNVLLLSFILCSFIYAATAIAGYLMFGSEVESEITLNLSSSKVSAKVAIYIITVSPIAKYPITITPVLDSIKNAIPENYNKRITHLALSTCVLISTVAVALGVSFFAYLTSLGGALCSVTCALLVPCVCYLKMTNAFRKVKVESVINWGIIVFGIAILIAGTYASLVEIMEAH 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00329 420 Pfam Transmembrane amino acid transporter protein 48 412 IPR013057 -
Bva12g00329 420 PANTHER OS05G0424000 PROTEIN-RELATED 46 418 - -
Bva12g00329 420 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 46 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00329 Bva-Chr12 5353722 5357941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00329 33 417 Amino Acid or Auxin Permease AAAP Family AT3G28960 47.727 5.26e-129 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00329 K15015 - qsu:112024308 452.21