Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00328 ATGGCGGCTAGAGAGAAAGATGGGTTGCCACTGAACACACCACTTCTGGTAGATGAGAAGCAATACGAGGTCAAGGTTTAcagtgaagaagaagatagcaAAGGCAAAGCCTCTTTCTTCAAGACTTGTTTCCACACCATCAATAGTATTACAGGAAGTGGGATAATCTCCATTCCATTTGCATTAGCTTCAGGAGGATGGCTAAGCTTGACGCTTCTCTTCGTGATCTCGATAGCTTCCTACTATTCAGGAATGCTGATTCAGAAATGCATGGAGATGAATTCCAATATCAAAGTCTATCAAGATTTAGGGCAACATGCATTTGGATATAAAGGAAGAGTAATAGTATTGATTGCCATGAACTATGAGCTGTACATGGTTGTAACAGGTTACTTGATTCTAGAAGGAGACAACATGAACAAAATTCTCCCAAATTTCCAAGTAGATGTTGCAGGATTGACCATTAGTGGTACCCAGTTGTTTATCTTAGTCACCGCTCTCATAATTTTGCCTATATTGTGGTTGGATAACTTGGTGTATCTCTCTTATGTCTCTGCAACTGGGGCTTTAGCTTCAATCATCTTCCTTTGTGCACTGTTTTGGTATGGAACTTTTGATGGACCAGGGTTCAATCAAAAGGGAACTCTCATCAGGTGGAGTGGAATTCCTTCAGCTGTTAGCTTGTTTGCATTTTGTTATAGTACCCATCCAGTCTTCCCAAATCTCTACACTACTATGAGAAACAAAACTCAATTCTCAAATGTCCTGCTTGTATCCTTTAGCCTGTGCACCTTCATTTATGCAGCAACAGCTGTTTTGGGTTATCTAATGTTTGGTTCAAAGGTTGCATCGGAGATAACCTTGAATCTTGCTTCTAACAAAGTGAGCACAAAAGTGGCAATATACATAGTTTTGGTGAGTCCCATAGCCAAATACCCATTAACAGTGACACCAGTGGTGGATTCTATAAAAAGTGCTTTTCCACCACATTACAACAAAAGGATAACACATGTAGTTGTAAGCACTTTTGTGCTAATAAGCACTGTGGTTGTAGCCATGGAAGTGCCCTTTTTTGCATATCTCATGTCACTGAGTGGAGCATTGTGCAGTGTCACCTGCGCATTGATAGTTCCATGCGTTTGCTACTTGAAGATTACAGACACTTTCAGAAAGATTAGAGCTGAAACGATCATCAACTGGGGAATAATAGTATTGGGTGTTGCAATTGCAATTGTGGGCACTTATGTATCTGTTGTGGAGATTATCCAAGCATATGATGATCAAGTTTCTAGCAGATTTTTCTTGAGGTTCATGTA 1316 0.3951 MAAREKDGLPLNTPLLVDEKQYEVKVYSEEEDSKGKASFFKTCFHTINSITGSGIISIPFALASGGWLSLTLLFVISIASYYSGMLIQKCMEMNSNIKVYQDLGQHAFGYKGRVIVLIAMNYELYMVVTGYLILEGDNMNKILPNFQVDVAGLTISGTQLFILVTALIILPILWLDNLVYLSYVSATGALASIIFLCALFWYGTFDGPGFNQKGTLIRWSGIPSAVSLFAFCYSTHPVFPNLYTTMRNKTQFSNVLLVSFSLCTFIYAATAVLGYLMFGSKVASEITLNLASNKVSTKVAIYIVLVSPIAKYPLTVTPVVDSIKSAFPPHYNKRITHVVVSTFVLISTVVVAMEVPFFAYLMSLSGALCSVTCALIVPCVCYLKITDTFRKIRAETIINWGIIVLGVAIAIVGTYVSVVEIIQAYDDQVSSRFFLRFM 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00328 438 PANTHER OS05G0424000 PROTEIN-RELATED 29 423 - -
Bva12g00328 438 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 29 423 - -
Bva12g00328 438 Pfam Transmembrane amino acid transporter protein 36 418 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00328 Bva-Chr12 5342666 5346559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00328 17 424 Amino Acid or Auxin Permease AAAP Family AT3G28960 50.611 9.42e-153 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00328 K15015 - jre:108985961 494.582