Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00327 ATGTATAAGCAGTCAATACAAGTACACCAAAAcccattttttaagaatttgtatAAATCTGTTGATTTCTCTCCTATTGACGATACAAGCCGCTATAGACAATCAAATCCTCTCTCAAGCCATTACCCGGAAACTCAAAAGCCACTTTCTCGGACTCCGTCGTCCTTCCCCGGAACACCGCCCTCCGCCACCTTCAGGTCAGCCATGGAAGAGAGGTTAAAGCTCGTGGTGGGGTTCATGGTGATGCTGtctctgttttctttcaaCCTGAAACAGAGTCTGTGTTTGGCTCTGAACGACGAAGGATTGGTGCTGCTGATGGTGAGGGACAGAATAGAGAGAGACCCGTTTGGAGGTTTATCGAATTGGAGAGGTGATGGTGGAGTTGTTGATCATTGTTCCTGGTTTGGAGTTGAGTGCTCTGACGGCAAAGTTGTCAGCTTGAACTTGAAGGATCTATGCCTCCAAGGAACTCTACCACCAGAAATTGGGAAGCTCACACACATAAAATCAATCATTTTACGCAACAATTCATTTTCTGGAGAAATTCCTGAGGAGATTCAGCAACTCAAGGAACTGGAAATTCTTGACCTGGGATACAACAACTTTAGTGGATCATTTCCATCTGATCTCACCAAAAATCCATCACTCACTGTCCTTTTACTGGACAACAATGACTATCTTGCGAACTTAACACCAGAAGTATATCAGCTCAAGACAATTTCTGAATTTCATGCAAATGAAGAGCAACTAACTGGTGCTTCCACTATAGCAGCATGTGGAAGAAGATCCGGTTTCGGGCGCATTACTCAACATACAGCAGCAGATAGGCGTCAACTTCTGCAGACAACAATTCCTCAAGAAATAGGTGATAATGAGAATCTTAGACTATCTCCATCATCTTCACCCTCTTCATTACCACCAGATTCTGGGCCTTTCTTATCATCACCATTATCAATTTCACCATCTGAACCTCCCTCAAATTCACCATCTGCATCGGCTCCATCGCCGTTCGTCTTTCTAGAAGTTTCCCCTTCACAGTATCCCTTTAGTAATTTTCTGACTCCTTCACCTGTGGAGGCACCAACTCCTGGCTTGTCAATCCCAGCAAATCCACCAGTTGTGTCCACTCCATCACAGTACAACTGGGTTTCAGCACCTTCTCCTAGTTTATCTTCTGGCCAAGAGAATACCAAGAGTTACAATTCAAAGCATCAGATCGTGATAATTTGGTCTACAGTTGGGAGCTTCTCCTTTCTGATCTTGGCTTCATGCATTGCTTTCGCTTTCTTCCGAAATAGCAAGGTTGTTACTGTAAAACCTTGGGCAACAGGGTTGAGTGGGCAGCTGCAGAAAGCTTTTGTAACAGGTGTACCAAATCTGAAAAGAGCAGAAATTATAGAAGCATGTGAAGATTTCAGCAATATAATTGAGTCTCTTGAAGATATTGCGATTTACAAAGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTGGTAGTGCCCACTGCAGTGACCTCTTCTAAAAATTGGTCAAAACACATGGAATCTCAATTCAGAAACAAGATAGAGACGCTATCAAGAGTGAACCACAAGAACTTCGTGAATCTTATTGGGTTTTGCGAAGAAAAGAAGCCATTTACAAGAATGCTAGTTTTTGAGTATGCTCCCAATGGAACTCTCTTTGAGCATCTACACATTAAAGAATCAGAGCACTTGGACTGGggaatgagaatgagaatagCAATGGGAATTGCCTTTTGTCTAGAGCATATGCATCAGCTGACACCATCTATAGCCCTCAGAAACTTGTTGTCTTCCTCTGTGTACCTCACTGAAGATTTTGCAGCTAAAATATCAGATCTCAGTTTCTGGAATGAAATAGCTTCTGCAGGAACCTGGCTCGGCGAAATATCGGTAAAGGACAATGTCTATAGCTTTGGCATGCTGTTGTTTGAGCTGATAACAGGTAGAATTCCCTATATTGTGGACAATGGCTTGGTTATCAGAGATTGGGTACTGGAATATCTGAGGGTGCAGCccttgagagatttggtggaTCCAACACTGAACCCTGTGCAACTGGAAGAGGTTGATAAATGGTCACAAGTGATAAAAGATTGTATGAATCCGAACTCAGAAGAAAGACCAACTATGAGAGAGATCACAGCTAAGTTGAAAGAGATTACTGGAATAGAAGCTGATGGAGCAGCACCAAAATTATCCCCTCTTTGGTGGGCAGAGCTTGAAATTTTGTCCCCAGAGTCAAGTTG 2270 0.4181 MYKQSIQVHQNPFFKNLYKSVDFSPIDDTSRYRQSNPLSSHYPETQKPLSRTPSSFPGTPPSATFRSAMEERLKLVVGFMVMLSLFSFNLKQSLCLALNDEGLVLLMVRDRIERDPFGGLSNWRGDGGVVDHCSWFGVECSDGKVVSLNLKDLCLQGTLPPEIGKLTHIKSIILRNNSFSGEIPEEIQQLKELEILDLGYNNFSGSFPSDLTKNPSLTVLLLDNNDYLANLTPEVYQLKTISEFHANEEQLTGASTIAACGRRSGFGRITQHTAADRRQLLQTTIPQEIGDNENLRLSPSSSPSSLPPDSGPFLSSPLSISPSEPPSNSPSASAPSPFVFLEVSPSQYPFSNFLTPSPVEAPTPGLSIPANPPVVSTPSQYNWVSAPSPSLSSGQENTKSYNSKHQIVIIWSTVGSFSFLILASCIAFAFFRNSKVVTVKPWATGLSGQLQKAFVTGVPNLKRAEIIEACEDFSNIIESLEDIAIYKGTLSSGVEIAVVVPTAVTSSKNWSKHMESQFRNKIETLSRVNHKNFVNLIGFCEEKKPFTRMLVFEYAPNGTLFEHLHIKESEHLDWGMRMRIAMGIAFCLEHMHQLTPSIALRNLLSSSVYLTEDFAAKISDLSFWNEIASAGTWLGEISVKDNVYSFGMLLFELITGRIPYIVDNGLVIRDWVLEYLRVQPLRDLVDPTLNPVQLEEVDKWSQVIKDCMNPNSEERPTMREITAKLKEITGIEADGAAPKLSPLWWAELEILSPESS 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00327 756 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 75 754 - -
Bva12g00327 756 MobiDBLite consensus disorder prediction 31 62 - -
Bva12g00327 756 Pfam Leucine rich repeat N-terminal domain 99 141 IPR013210 -
Bva12g00327 756 Pfam Protein tyrosine and serine/threonine kinase 485 725 IPR001245 GO:0004672|GO:0006468
Bva12g00327 756 SUPERFAMILY Protein kinase-like (PK-like) 485 725 IPR011009 -
Bva12g00327 756 MobiDBLite consensus disorder prediction 288 334 - -
Bva12g00327 756 Gene3D Transferase(Phosphotransferase) domain 1 555 735 - -
Bva12g00327 756 MobiDBLite consensus disorder prediction 288 327 - -
Bva12g00327 756 Gene3D Ribonuclease Inhibitor 97 270 IPR032675 -
Bva12g00327 756 SUPERFAMILY L domain-like 98 255 - -
Bva12g00327 756 Gene3D Phosphorylase Kinase; domain 1 443 554 - -
Bva12g00327 756 ProSiteProfiles Protein kinase domain profile. 436 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00327 756 MobiDBLite consensus disorder prediction 31 63 - -
Bva12g00327 756 PANTHER PROTEIN MALE DISCOVERER 2 75 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00327 Bva-Chr12 5330132 5336732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00327 77 729 Receptor kinase-like Gene Family AT1G25320 25.412 8.38e-42 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Bva12g00327 PK_Tyr_Ser-Thr 2.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00327 - - gmx:100814122 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00327 12 5330132 5336732 Bva12g00327 12 5330132 5336732 ECH