Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00322 ATGGACAAACTCACTAAGGCAAATGTTGGTGGCGCAATGGAAGAGCAATTGTGCAACACCAAACTTGTTGAAATTAATCCGATTCAGCAGATAGATCCAGCTAAATTTCCTTCGGACACTGATTCATCGCGAAAACCCTACATCAGCCGTGGTGAAGCCGGAGCCAGAACCAATGCCTCGGTCGATACTGCTGAGCAAGTTGACATAGTCCAAGCAGCAAAACCTAAATCGGGTCATGATTTTAATGCGGATATGGATCCTAAGAAACTCCAGCGGGTCATGGCAAATCGAATTTCTGCACAAAAATCtaggataaaaaagaaattttatgtcGCAGATTTGGAGAGGAAAGCTCGAATTTTACAGGATGAAACAAACCTTCTTCTTTCACAAGTTGCAACCTATACAAAAGAGATCCAGATTTTGATTATGGAGAATCAGAACATGATTCAAAAAATGGCTGAtcttgagaaaatgaaaataattcaagaaGctgaaattgaaaagaacaaGGCAGAACTGTGTATGCTGAGAGAAATTTTCAACAAACAATATGCTTTGTA 563 0.3641 MDKLTKANVGGAMEEQLCNTKLVEINPIQQIDPAKFPSDTDSSRKPYISRGEAGARTNASVDTAEQVDIVQAAKPKSGHDFNADMDPKKLQRVMANRISAQKSRIKKKFYVADLERKARILQDETNLLLSQVATYTKEIQILIMENQNMIQKMADLEKMKIIQEAEIEKNKAELCMLREIFNKQYAL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00322 187 Pfam bZIP transcription factor 88 146 IPR004827 GO:0003700|GO:0006355
Bva12g00322 187 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 149 IPR004827 GO:0003700|GO:0006355
Bva12g00322 187 SMART brlzneu 84 148 IPR004827 GO:0003700|GO:0006355
Bva12g00322 187 PANTHER BASIC LEUCINE ZIPPER 34 28 181 - -
Bva12g00322 187 Gene3D - 88 140 - -
Bva12g00322 187 SUPERFAMILY Leucine zipper domain 88 143 IPR046347 GO:0003700|GO:0006355
Bva12g00322 187 MobiDBLite consensus disorder prediction 32 60 - -
Bva12g00322 187 CDD bZIP_plant_RF2 89 140 IPR044759 GO:0003700|GO:0006355
Bva12g00322 187 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 92 106 IPR004827 GO:0003700|GO:0006355
Bva12g00322 187 Coils Coil 139 173 - -
Bva12g00322 187 Coils Coil 111 131 - -
Bva12g00322 187 PANTHER ACTIVATOR OF SPOMIN LUC3 28 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00322 Bva-Chr12 5301547 5302788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00322 64 167 bZIP Transcription Factor Family AT3G58120 33.654 4.98e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva12g00322 bZIP_1 1.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00322 - - jcu:105640724 103.605