Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00316 ATGACACTCACTACCACCACCACCAAGAACAAGGTTCTGTTCATCATGGGCACAACAGGCACTGGAAAAACCAAGCTATCCCTCAGCCTTGGCAGCTCATTCCCCAGTGAAATAATCAACTCTGACAAAATCCAGGTCTACAAGGGCCTTGATGTTGTCAGCAACAAGGTGTCCGAGACCGAGCAACGCCGCATCCCACACCACTTGCTAGGCATCATTGACGATCCAGACATGGACTTCTCTATCAGTGATTTCTGTAGCAAAGTGCTTTCTGCACTTGACCAAATCACGGAACGCGGAAATCTACCCATAATTGTGGGTGGATCCAACACTTACCTGGAAGCTTTAGTTGAAGATCCTGCGAATGATTTTCGATCCAAATATGATTGCTGTTTCATTTGGCTTGATGTGTCTTTGCctgttttgtttgattatttagGAAAAAGGGTTGATGTGATGATTGAGGAGGGGTTTGTGGATGAGATCAGAGAAGCTTTTGTCTCCGATGCTGACTATTCTCGCGGGCTTCGAAGGGCCATTGGAGTTCCTGAATTTGATCAGTTCATGAGGGCTAAGAAGGAAGGGCAAGATGAGGCTCACTTGGAGGAGTTGCTGGAGGATGCTACAGCAAGAACCAAAGAGAACACTAACAAATTGGCTGAAGTTCAGCTGGGGAAGATTCACAGGCTGAAGAATGAGCGCGGCTGGGAATTGAAGAGGATCAATGCTACTCCAGTTTTTGAAGCCATTGCAAAAGGGGACAAGTATGAGAGTGTTTGGGAAGAGATTGTATTCAAACCCAGTTTGAAAATTGTGATGAGTTCTCTGggtta 833 0.449 MTLTTTTTKNKVLFIMGTTGTGKTKLSLSLGSSFPSEIINSDKIQVYKGLDVVSNKVSETEQRRIPHHLLGIIDDPDMDFSISDFCSKVLSALDQITERGNLPIIVGGSNTYLEALVEDPANDFRSKYDCCFIWLDVSLPVLFDYLGKRVDVMIEEGFVDEIREAFVSDADYSRGLRRAIGVPEFDQFMRAKKEGQDEAHLEELLEDATARTKENTNKLAEVQLGKIHRLKNERGWELKRINATPVFEAIAKGDKYESVWEEIVFKPSLKIVMSSLG 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00316 277 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5 274 - -
Bva12g00316 277 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 139 238 - -
Bva12g00316 277 Gene3D - 9 274 IPR027417 -
Bva12g00316 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 168 IPR027417 -
Bva12g00316 277 Pfam IPP transferase 125 224 - -
Bva12g00316 277 Pfam IPP transferase 45 119 - -
Bva12g00316 277 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 5 274 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00316 Bva-Chr12 5195771 5197242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00316 88 276 C2H2 Transcription Factor Family AT2G27760 29.767 2.60e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00316 K10760 - gmx:121173984 348.591