Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00298 ATGAACCCATCAGAGCAATTTGTTGAACAAGGAATATCTCACCAGAATTTAAAGAAAGCATCATGTGCAACTGTGCTCACTTTGGCTTATCAAAGTCTTGGAGTAGTTTATGGTGACCTCAGTACCTCCCCTCTCTATGTTTACAAGACCACCTTCTCTGGGAAACTGAGCCTCGAAGAGGATGATGAAGAAATCTTTGGGGTGCTTTCATTTATCTTCTGGACTTTCACTGTCATTGCTCTCTTCAAATACGTTTTCATTGTGATGTCTGCTGATGATAATGGGGAAGGAGGAACCTTTGCATTATACTCACTTCTTTGCCGACATGCGAGACTAGGCATTTTACCCAATCAACAACCCACAGATGAGGAGTTGTCTGCTTATGCCACTGAACATACTGCAGACACAGGGCAGTCTACTCTTCTAAAGTTGTTCATTGGAAAGCACCAAAGATTCCAGAAAGGATTATTCATCTTTGTTCTGCTAGGAACCTGTATGGCAATTGGAGACGGTGTAATTACTCCTGCAATATCAGTTCTTTCGGCAGTGTCAGGTGTTAAAGTTAAAATCAGTCAACTCCATGATAATTATGTTGTTATAATCTCGTGTGTCATTTTAGTGGTCCTTTTCTCCATTCAGCATCATGGGACACATAGAGTTGCATTCTTGTTTGGCCCAGTCGTTGCAGCATGGCTTTTCTGTATCAGTGGTATTGGTATATACAATATATGCCACTGGAATCCACAAATATATCGCGCACTTTCTCCCATTTACTTGTTCAGGTTTCTCAGGACCACAGGCATTCAAGGATGGGTTTCATTAGGGGGAGTGGTGCTTTCAATCACAGGTGTGGAGACAATGTTTGCTGACTTGGGTCATTTTTCTGCACTCTCAATAAAGATAGCTTTCACCTGTCTAGTATATCCATGCCTGATTCTGGCATATATGGGTGAGGCTGCTTTCCTCTCCAAGCACCATGATGACATTCAGAGAAGTTTTCACAAAGCCATACCAGaAGCTGTATTTTGGCCAGTGTTCATAGTGGCCACTTTTGCAGCTGTTGTAGGAAGTCAAGCAGTAATTTCTGCTACCTTTTCTATCATAAGCCAGTGCTGTGCATTAAACTGTTTTCCCCGGGTGAAGATTATTCATACTTCAAGCAGAATTTATGGACAGATATACATTCCAGAAGTCAATTGGATGTTGATGTGCCTTTGCGTAGCTGTCACAATTGGCCTGAGGGATACAAACATGATAGGTCATGCATATGGACTGGCGGTCACCACTGTTATGTTTGTGACAACTTGCCTGATGGCACTAGTCATTTTAATCGTCTGGAAGCAAGGAATAATAAAAGCCATTGCATGTCTGTTCTTGTTTGGATCCATTGAACTGCTTTACATCTCAGCATCAATCTGCAAGGTCCCCGAAGGAGGTTGGATCTCACTTGTGCTATCTTTTATCATCATGGGCATAATGTATACATGGAACTATGGAAcaatgaagaaacaccaatTTGAAGTGGAAAACAAGGTTTCAATGAGCAGGATTCTATCCTTGGGACCTCGACTTGGTATGGTTCGAGTTCCTGGAATAGGACTCATTTACACTAATCTGGCTTATGGGGTCCCAGCTATTTTTGGACATTTTGTTACAAACTTGCCAGCATTTCATCAGGTGCTTGTTTTTGTCTGTGTCAAATCTGTTCAAGTCCCTTATGTTGATGAACATGAACGGCTTGTCCTCAGCAGAGTTGGTCCAAGGGAGTATGGAATGTTTCAGTGCATTGTCCGGTATGGTTACAAGGATCTACAGCAGGAAAACTACAATTTTGAGAACAAATTGGTATCTGGGTTAATACAATTTGTAGAAACAGAAGAGAATGTTCTAGAACCAACCCATGTGGAAGAACTTGATGTTGCACGGCACACAAATTATGAAGAGAATTTGCTCTCATTTTCATGTGATTTTCAGGTGATGAAAAATGGTAACAGCCATATTCGAGATTCTCTTTATAAAGACGAGTCTCTGCAAATTCTGAGAGCCAAAGAATCTGGTGTTGCCTATATTCTTGGGCATTCCTATGCAAAGGCAAAGGAATCATCATCCATCTTGAAGAAATTTGCGATAGATTTTGTGTTTGCTTTTCTTAGCAAGAATTGCAGAGAGCCTGATGTTGTTCTGAATATACCTCATACTTCTTTGCTGGAGGTTGGCATGATTTACTATGTTTA 2234 0.4078 MNPSEQFVEQGISHQNLKKASCATVLTLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLEEDDEEIFGVLSFIFWTFTVIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLGILPNQQPTDEELSAYATEHTADTGQSTLLKLFIGKHQRFQKGLFIFVLLGTCMAIGDGVITPAISVLSAVSGVKVKISQLHDNYVVIISCVILVVLFSIQHHGTHRVAFLFGPVVAAWLFCISGIGIYNICHWNPQIYRALSPIYLFRFLRTTGIQGWVSLGGVVLSITGVETMFADLGHFSALSIKIAFTCLVYPCLILAYMGEAAFLSKHHDDIQRSFHKAIPEAVFWPVFIVATFAAVVGSQAVISATFSIISQCCALNCFPRVKIIHTSSRIYGQIYIPEVNWMLMCLCVAVTIGLRDTNMIGHAYGLAVTTVMFVTTCLMALVILIVWKQGIIKAIACLFLFGSIELLYISASICKVPEGGWISLVLSFIIMGIMYTWNYGTMKKHQFEVENKVSMSRILSLGPRLGMVRVPGIGLIYTNLAYGVPAIFGHFVTNLPAFHQVLVFVCVKSVQVPYVDEHERLVLSRVGPREYGMFQCIVRYGYKDLQQENYNFENKLVSGLIQFVETEENVLEPTHVEELDVARHTNYEENLLSFSCDFQVMKNGNSHIRDSLYKDESLQILRAKESGVAYILGHSYAKAKESSSILKKFAIDFVFAFLSKNCREPDVVLNIPHTSLLEVGMIYYV 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00298 744 TIGRFAM kup: potassium uptake protein 28 744 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva12g00298 744 Pfam K+ potassium transporter 30 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva12g00298 744 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 669 744 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva12g00298 744 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 633 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva12g00298 744 PANTHER POTASSIUM TRANSPORTER 669 744 - -
Bva12g00298 744 PANTHER POTASSIUM TRANSPORTER 2 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00298 Bva-Chr12 5044428 5049078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00298 122 744 Inorganic Solute Cotransporters AT2G30070 68.860 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00298 K03549 - gmx:100798458 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00298 12 5044428 5049078 Bva12g00298 12 5044428 5049078 ECH