Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00293 ATGGATGTGTCTGAAGCTGGACTTAGAAAGGAGACCCCATTCAAGTCAGATGCAACGGCtgaggaagaagaatatgCTTATCAGTCTAACTTACTTCAACAATTCACTAGTATATCTAACATTGACAAGGCATGGATTTTTAAGTCTGATAGCGCACTCTTCTCTCGGTGCTTGTTCTCTGTTAGCCAACCAAATCTTTTggcaaacaagagaaagaaatccaTTATATCGTCTTACATCTCCAAAGAAAGTAATGGTTCAGTAAACTTTCATTGGGTTCCATTTCCAGTAGAGATGTCTGGAGTTTCTGCAATTGTTCCATCACCTTCTGGCTTGAAACTTCTAGTAATTCGAAATCCTGAGAATGGAAGTCCTTCTCACTTTGAAATTTGGAATTCTTCTCAAATGGAGAAAGAGTTTCATATCACCCAATCAGTTCATGGTTCAGTATATACCGATGAATGGTTTCAGGGAATCTCTTGGAATAAGGATGAAACTTTTATTGCATATGTAGCTGAAGAGCCCTCTCCCTCAAAACCCACATTCAATCATTTGGGCTACAAGAAAGGTGGTTCTGCTGACAAGGATTCTGATAGCTGGAGAGCTCAAGGTGATTGGGAGGATGACTGGGGAGAAACATATGCCGGAAAAGGACGACCTGCACTTTTTGTCATCAACATCAACAGTGGAGAGGTAGAAGCTGTAAAGGGCATTGATCAATCTTTAAGTATTGGCCAAGTTGTATGGGCTCCTTCTACTGAAGGCTCTGAACAATACTTGGTATTTGTTGGTTGGTCATCTGAGACAAGAAAACTTGGTATTAAGTACTGCAATAACAGACCTTGTGCATTATATGCTGTTAGAGCACCACACCACCATGGGTCAAAAGCTAAAGATGAACATGAGGTCCATTCAAGTGAAGAGTCTCGTGTGCTTAACTTAACTCAAGCCCTAAGTAGTGCCTTGTTTCCCCGATTCAGCCCAGATGGAAAGTTCCTTGTGTTTTTATCTGCAAGAAGTGCTGTGGATTCTGGAGTCCACTGGGGAACGAACTCTCTTCATAGAATTGATTGGCCAACTGATGGGAAACTGTACCAATCCACAAATATTTATGATGTTattccTGTTGTGATGTGTTCTGAGGATGGTTGCTTCCCTGGGCTTTACTGTTTAAGTATGCATAGTAATCCATGGCTTTCTGATGGCTGCACAATGATCGTATCATCGATCTGGTATAGCCGTGAAGTCTTGCTTTCTGTGAATGTGATGAGTGGGGAAATATCCCATGTCAGCCTGGCAAACTCAAATTTCTCATGGAATCTTCTTTCACTGGATGGAAACAATATCGTTGCCGTTTCTAGCAGTCCAGTAGATCTTCCTCAAATCAAGTATGGAACTTTCAATGAGAAGGCAACTGAAAGTACTGCATGGAGTTGGTCAGATATATCAAGGCCCATATTTAGGTGCTCTGACAAGGTTAGATCTTTGTTGTCCTCTCTTCAGTTCAACCTAATAAAGATCCCAATCAAGGATGCTTCTGATAACCAAACAAAAGGTGCCAGTAAACCTTTTGAAGCAATCTTATTGTCTtctaaaactaagaaaagtgATCCGCTGATTGTGAGCCTTCATGGTGGACCACACTGTGCCTCGATAAcaagtttttcaaaatctttggCTTTTCTATCTTCACTTGGATATAGTTTGCTGATTGTAAATTACAGAGGCTCAATAGGATTTGGTGAAGAAGCCTTACAGTCTCTCCCAGGGAAAGTTGGGACTCAGGATGTTAATGATGTACTCATTGCCATAGATCATGTTGTCAACTTGGGACTTGCTAGTCCATCCAAGATTACAGTGATGGGAATTTCGCATGGTGGGTTTTTGACAACTCACTTGATTGGCCAGGCACCAGAGAAGTTTGTTGCAGCAGCTGCACTAAATCCTGTTTGTAATCTTGCAGTGATGGTTGGTACAACTGATATCCCTGAATGGTGTTATGTGAATGCCATTGGAACCTCTGCCAGAAATAGTTTTACCAAAGCACCTTCAGCAGAGGATCTGCCTCTTTTATATGGCAAGTCTCCTATTGCACACCTATCAAAGGTAAAAGCACCAACACTTTTCCTATTAGGCGCTCAAGATCGTCGTGTTCCGATTTGTATAGGATTGCAGTATGCAAGGGCTTTAAAGGAGAAAGGTGTTGAGGTCAAAATCATGATGTTTCCAAATGACGTTCACGAGCTGGATAGACCGCAAACTGATTTTGAATGTCTTCTTAACATTGGGGTGTGGTTCAACAAGCATTGCAAATG 2315 0.4022 MDVSEAGLRKETPFKSDATAEEEEYAYQSNLLQQFTSISNIDKAWIFKSDSALFSRCLFSVSQPNLLANKRKKSIISSYISKESNGSVNFHWVPFPVEMSGVSAIVPSPSGLKLLVIRNPENGSPSHFEIWNSSQMEKEFHITQSVHGSVYTDEWFQGISWNKDETFIAYVAEEPSPSKPTFNHLGYKKGGSADKDSDSWRAQGDWEDDWGETYAGKGRPALFVININSGEVEAVKGIDQSLSIGQVVWAPSTEGSEQYLVFVGWSSETRKLGIKYCNNRPCALYAVRAPHHHGSKAKDEHEVHSSEESRVLNLTQALSSALFPRFSPDGKFLVFLSARSAVDSGVHWGTNSLHRIDWPTDGKLYQSTNIYDVIPVVMCSEDGCFPGLYCLSMHSNPWLSDGCTMIVSSIWYSREVLLSVNVMSGEISHVSLANSNFSWNLLSLDGNNIVAVSSSPVDLPQIKYGTFNEKATESTAWSWSDISRPIFRCSDKVRSLLSSLQFNLIKIPIKDASDNQTKGASKPFEAILLSSKTKKSDPLIVSLHGGPHCASITSFSKSLAFLSSLGYSLLIVNYRGSIGFGEEALQSLPGKVGTQDVNDVLIAIDHVVNLGLASPSKITVMGISHGGFLTTHLIGQAPEKFVAAAALNPVCNLAVMVGTTDIPEWCYVNAIGTSARNSFTKAPSAEDLPLLYGKSPIAHLSKVKAPTLFLLGAQDRRVPICIGLQYARALKEKGVEVKIMMFPNDVHELDRPQTDFECLLNIGVWFNKHCK 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00293 771 Gene3D alpha/beta hydrolase 520 770 IPR029058 -
Bva12g00293 771 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 16 771 - -
Bva12g00293 771 SUPERFAMILY DPP6 N-terminal domain-like 95 462 - -
Bva12g00293 771 Pfam Prolyl oligopeptidase family 554 770 IPR001375 GO:0006508|GO:0008236
Bva12g00293 771 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 16 771 - -
Bva12g00293 771 ProSitePatterns Prolyl endopeptidase family serine active site. 599 629 IPR002471 GO:0004252|GO:0006508
Bva12g00293 771 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 22 292 IPR045550 -
Bva12g00293 771 SUPERFAMILY alpha/beta-Hydrolases 533 770 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00293 Bva-Chr12 4963690 4971564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00293 528 768 Carbohydrate Esterase AT5G36210 24.896 1.40e-16 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00293 K01303 - gmx:100812681 1134.4