Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00289 atGGCTTCATCTGATGAATCTGATTCTCCTTCTTCTACACCAAGCACTGATCAACCGCCTCCATCGCCACCTAATGATTCATCTTCGATgtctccaccaccaccaccaccaccaccatcacCATCACCGTCCAAAGAATCACCGCATTCCCCAAAGAAGTCCTCGCCATCACCGCATGCAACTCCGggttcttcttcctcctccagATCAAAACCAACATCATCAGCACCAAAGTCACCAAGATCACATGATGTACTATCGTTACCGGATCATCATGAGGAtgattcattttcaaaaagagCAGCAGTGGGAGCAGCCGTAGGCCTAggcctaattttttttatttgggtcATCATTTACATAGTTCGCTCgataaggaagaaaaaagagaaaaattactaTGTAGATGGAAAAGGGAAGGACTATCACAGTAGCAGACATCCCTCCATTTATTACTCAAGTCAAAAGGGAGAACATGTTGtaagaatgaaagaaatggGTAGTTGGGATGGAAGACCTCCATTTTCACAAGGAACGAGTAACACTCAGTCAAGCTATAATTTCTCTTCAATGGCATCACTGcatcctcctcctcctccaacTCCGCAGGGCACTTTCTCTTATGAGGAATTGAAGTCTGCTACCGAAGGATTCGACGAAAAGAACCTGTTGGGACAGGGTGGCTTTGGCTATGTCCACAAGGGAGTATTGCCTAATGGAAAGGAAATTGCAGTTAAGAGCCTTAAAGCAAATAGTGGGCAAGGAGAGATTGAATTCCAAACCGAGGTTGACATCATTAGTCGTGTTCATCATCGCCATCTTGTGTCGCTTGTTGGATATTGTATTGCTGGCAGAAAGAGATTGTTGGTCTATGAATTTGTCCCCAATAAGACACTAGAATATCACCTTCATGAAAAGGCTACGCCTACCATGGATTGGTCTACTAGACTACGGATTGCAATAGGATCTGGTAGAGGGCTTGCATACCTCCATGAAGACTGTAATCCACGAATTATTCACCGTGATATCAAAGCTTCAAATATCCTCCTCGATGAATACTGTGAACCCAAGGTTGCTGATTTCGGATTGGCGAAATTgacaaatgataataatactCATGTCTCAACTCGTGTCATGGGAACATTTGGGTACCTAGCACCAGAATATGCATCCAGTGGAAGATTGACTGAGAAATCTGATGTTTACTCATATGGGGTCATGTTATTGGAACTTATCACTGGGAAGCAACCTACAGGTGAAACCATGAGAGCACATGAGGATGGCTTAGTTGATTGGGCTCGGCCACTATTGAACTCTGTACTGCAGGATGGGAACTTCAGAGATTTGGTAGATCCATTTTTGGAGGGCAATTACAAGGCAGAAGAAATGATGAGGATGGCACACTGTGCTTCTGCAAGCATTCGTCATTCTTCGAAAAGGCGTCCTCGGATGAGCCAGATAGTTAGAGTATTGGAAGGAGTTTTATCACTGGAAGACTTGTCCTCTAATTGAAGTCTTCCCTAA 1524 0.3911 MASSDESDSPSSTPSTDQPPPSPPNDSSSMSPPPPPPPPSPSPSKESPHSPKKSSPSPHATPGSSSSSRSKPTSSAPKSPRSHDVLSLPDHHEDDSFSKRAAVGAAVGLGLIFFIWVIIYIVRSIRKKKEKNYYVDGKGKDYHSSRHPSIYYSSQKGEHVVRMKEMGSWDGRPPFSQGTSNTQSSYNFSSMASLHPPPPPTPQGTFSYEELKSATEGFDEKNLLGQGGFGYVHKGVLPNGKEIAVKSLKANSGQGEIEFQTEVDIISRVHHRHLVSLVGYCIAGRKRLLVYEFVPNKTLEYHLHEKATPTMDWSTRLRIAIGSGRGLAYLHEDCNPRIIHRDIKASNILLDEYCEPKVADFGLAKLTNDNNTHVSTRVMGTFGYLAPEYASSGRLTEKSDVYSYGVMLLELITGKQPTGETMRAHEDGLVDWARPLLNSVLQDGNFRDLVDPFLEGNYKAEEMMRMAHCASASIRHSSKRRPRMSQIVRVLEGVLSLEDLSSNSLP 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00289 506 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 7 503 - -
Bva12g00289 506 SUPERFAMILY Protein kinase-like (PK-like) 193 491 IPR011009 -
Bva12g00289 506 Gene3D Transferase(Phosphotransferase) domain 1 294 503 - -
Bva12g00289 506 SMART serkin_6 218 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00289 506 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 7 503 - -
Bva12g00289 506 Pfam Protein tyrosine and serine/threonine kinase 221 422 IPR001245 GO:0004672|GO:0006468
Bva12g00289 506 MobiDBLite consensus disorder prediction 14 46 - -
Bva12g00289 506 ProSiteProfiles Protein kinase domain profile. 218 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00289 506 MobiDBLite consensus disorder prediction 47 81 - -
Bva12g00289 506 MobiDBLite consensus disorder prediction 1 94 - -
Bva12g00289 506 ProSitePatterns Protein kinases ATP-binding region signature. 224 246 IPR017441 GO:0005524
Bva12g00289 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Bva12g00289 506 Gene3D Phosphorylase Kinase; domain 1 180 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00289 Bva-Chr12 4910498 4915148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00289 57 504 Trihelix Transcription Factor Family AT1G70460 46.943 1.29e-134 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva12g00289 PK_Tyr_Ser-Thr 4.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00289 - - gmx:100788987 516.153