Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00279 ATGAAATTCTCAACTTCTTATTCATCTCCagcatcatcatcttcatcaaccCTTGCTTTTGACCCAGCAATGTGCACTTCGAAGAGTGCCACTGCTGGGCGTCTCATTGCAATTCTGCGCAGAATCCTCTGTTCTAGGGGTCTCCCAACACACCCATCCTATCAAATTACAGAACTTGATTCCATAGTGCTTGAAAAGGATCAAGAATTGAAAACCCAGAAGAAGAAGGTTGAAGAAGCTGCTGCCATTGTTTCTTTAAATACTCTTGGAATTGTTGCTAGATTAATGGGGTTGGATTCAATGGTAGAAAGAGAAactccatcttcttcttcagttTCACGTAGCCGATCCATGAATTCAATGCAGGGTTTGCATAAAAGGGTTAAATCTACGTTGTCGTTTCGTGAAGTTCCACCCTTTGTTGAGCTAGAAAATGAGAATTTCTTCATCCTCTGCTTCGAGAATGTGAGAGAGAGTAAAGAGTTTAGATCAAAGGGGAAGAAAACAGAGATGGGTTCTGTAGAGTTGAGGCAGAAACGatcagagagaaagaaaatgaaggaaaataggAGAGAAAATGTGTCTCCAGAGAAGATTCTGCATGAAAATGGTAAGCTTCAAGAAATTACCAACACTCTGTCTCAGTTCAAGGTTTCTTCAGAAGCTGGGAAATTCTCAGAAGAactgaagaggaagaagaagaagaagaagaagaagaaaataagttgCAGCACAGAAAACAAGATAGAACTTGACAGCAATTCAGAAGAATCAAGCCCAGTTTCTGTTCTAGATTTCGAGCGCAAAGCTCATCAATCAGATGCTGATTCTTGTGAGATAGGATTGAgttcaagaagaaaattatctaCAGAACTTGAAAATGAGCAGCAATGTCCTCTGCTTTTTGATGGAAACTTGATGgttgaagagagaaagataaaagGTAAAATTGGGAAGCAGAAATATGATAATGGATCAAATTCAAAGAGAATGGAGAAGCAGTCCATGGACATTTGTAATGAAGTTTTCAGGCTAGTTGGAGATGATTTGGTTGGATCAGAAGGTATAGAATCAAGGATGTGGAAGCATGGTGATTCTCATGGTTTAAGTGCAGATTTTGAGTCTGAAATTTTTGATCACTTATTAGGTGAGTTCATAGATCAACTTGTAGGACACCCTTTGAAAACtttgta 1193 0.3428 MKFSTSYSSPASSSSSTLAFDPAMCTSKSATAGRLIAILRRILCSRGLPTHPSYQITELDSIVLEKDQELKTQKKKVEEAAAIVSLNTLGIVARLMGLDSMVERETPSSSSVSRSRSMNSMQGLHKRVKSTLSFREVPPFVELENENFFILCFENVRESKEFRSKGKKTEMGSVELRQKRSERKKMKENRRENVSPEKILHENGKLQEITNTLSQFKVSSEAGKFSEELKRKKKKKKKKKISCSTENKIELDSNSEESSPVSVLDFERKAHQSDADSCEIGLSSRRKLSTELENEQQCPLLFDGNLMVEERKIKGKIGKQKYDNGSNSKRMEKQSMDICNEVFRLVGDDLVGSEGIESRMWKHGDSHGLSADFESEIFDHLLGEFIDQLVGHPLKTL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00279 397 Pfam DUF761-associated sequence motif 90 101 IPR032795 -
Bva12g00279 397 MobiDBLite consensus disorder prediction 164 198 - -
Bva12g00279 397 MobiDBLite consensus disorder prediction 103 124 - -
Bva12g00279 397 PANTHER - 2 396 - -
Bva12g00279 397 PANTHER OS05G0128300 PROTEIN 2 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00279 Bva-Chr12 4440132 4442027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00279 27 389 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 30.130 5.34e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00279 - - gmx:102660191 286.189