Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00277 ATGAAGCTGTCATCATTGACTCAAACAAACATTGGTTTGCCATTCATAACTGCCACTGCAGATGGCCCCAAGCACATTGAGACTACCCTTACAAGGGCTAAATTTGAGGAATTATGTTCAGATCTTCTTGACAGGGATGCAAAACTTTCCTTCAAGGATATTGATGAGATGAAGTGGTGGTCGCCCTTGGTGTTGCAGTTCAGgTTGGAGATCTTCCGCTTGGATGGTATTCCTCCTGCACCTCGTGGAGTTCCACAGATTGAGGTCAAATTTGACATTGACGCCAATGGCATTCTCTCACTCACTGCCGTAGACAAGGGCACTGGGAAGAAGCAAGATATTACCATCACTGGCACTAGCACCTTGCCTAAAGATGAGATAAAGAGAATGGTGAAGGAGGTAGAGAAATTTGCGAGTGAGGACAAGGAGAAGAGTGACGCCATTGACGCAAAGAACCAGGCTGAGAAACACTTGAAAGAACTGGGAGACAAGGGTGCCATGGCTGCCCTCAACCAGGAAGTCATGCAACTTGGTCAATCCCTTTACAACCAACCTGGAGCCGCTGGCGCAGGAGAGGCTGGCCCTTCAAAATCATCTGGCAAGGGACCAGATGGGTA 617 0.4797 MKLSSLTQTNIGLPFITATADGPKHIETTLTRAKFEELCSDLLDRDAKLSFKDIDEMKWWSPLVLQFRLEIFRLDGIPPAPRGVPQIEVKFDIDANGILSLTAVDKGTGKKQDITITGTSTLPKDEIKRMVKEVEKFASEDKEKSDAIDAKNQAEKHLKELGDKGAMAALNQEVMQLGQSLYNQPGAAGAGEAGPSKSSGKGPDG 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00277 205 SUPERFAMILY Actin-like ATPase domain 2 57 IPR043129 -
Bva12g00277 205 PANTHER HEAT SHOCK PROTEIN 70KDA 1 57 IPR013126 GO:0005524|GO:0140662
Bva12g00277 205 PANTHER STROMAL 70 KDA HEAT SHOCK-RELATED PROTEIN, CHLOROPLASTIC-LIKE 1 57 - -
Bva12g00277 205 Pfam Hsp70 protein 2 47 IPR013126 GO:0005524|GO:0140662
Bva12g00277 205 Pfam Hsp70 protein 70 164 IPR013126 GO:0005524|GO:0140662
Bva12g00277 205 PANTHER HEAT SHOCK PROTEIN 70KDA 70 164 IPR013126 GO:0005524|GO:0140662
Bva12g00277 205 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 71 155 IPR029047 -
Bva12g00277 205 PANTHER STROMAL 70 KDA HEAT SHOCK-RELATED PROTEIN, CHLOROPLASTIC-LIKE 70 164 - -
Bva12g00277 205 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 66 171 IPR029047 -
Bva12g00277 205 MobiDBLite consensus disorder prediction 181 205 - -
Bva12g00277 205 Gene3D Actin; Chain A, domain 4 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00277 Bva-Chr12 4414651 4416067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00277 72 157 Calmodulin-binding Proteins AT3G09440 60.920 1.57e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00277 K03283 - mnt:21385906 181.03