Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00246 ATGGAGTCTCGTCATGATTTGGAGAATAACAATCATCACCACCACCACAACGGCAGTGGCAAAAACGGCGTCGTTCAAGGGTTTCGGACGCCGGAACACGTGTCGTCTTCCATAGTGAGAAAGAAATCGGACCCTGTTATGGTGGGAAGTGACAATGGATTCCAAGTGCTGAGAAACTTTGTGGCCAATTTGCAAGAGGTTATCTTTGGCACTAAGCTTGTTGTGCTTTTTCCGGCAGTCCCTTTAGCTGTTGCTGCAGATTTTTATAGCTTCGGAAGGCCTTGGATTTTTGCTCTGAGCTTACTTGGACTCGCCCCGTTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCGTATTACACTGGTCCAACAGTTGGCGGGCTTCTGAATGCAACCTGTGGTAATGCAACTGAGATGATTATAGCAATATTGGCACTTCGCAAGAACAAAGTGCATGTTGTGAAGTTCTCCCTCTTGGGTTCCATTCTTTCAAATCTTCTGTTGGTTCTTGGGACTTCTCTTCTCTGTGGAGGCTTAGCCAATCTCAGAAAGGAACAAACATATGATAGAAAACAAGCAGATGTAAACTCACTGCTTTTGTTGCTGGGGTTGCTGTGCCATTTGCTGCCATTGATGTTCAAATATGCCTTAGAAGGGAGCATCTATCCTATAGATACCTATACTCTTCAATTGTCAAGAGCAAGCAGCATTGTTATGCTTCTAGCATACATTGCATATATCTTCTTCCAATTAAAAACTCATCGACAATTGTTTGATTCACAAGAGGAgggtgaagaagaagaaaagccaGTGATAGGATTTTGGAGTGCATTTACCTGGCTTGTGGGTATGACAATGATCATATCCCTTCTATCAGAATATGTTGTGGGCACCAttgagGCTGCATCAGATTCTTGGGGTATTTCTGTTAGCTTCATCAGCATAATTTTGCTACCCATTGTGGGGAATGCTGCAGAGCATGCTGGCTCAATAATATTTGCTTTCAAGAACAAGTTGGATATTTCTCTGGGTATTGCTATGGGATCTGCAACACAAATTTCAATGTTTGTGGTTCCACTAAGTGTGCTGGTTGCATGGACAATGGGGATCCAAATGGATTTAGATTTCAATCTCCTTGAAACTGGCTCTCTTGCTTTTACAATAATTGTTACAGCATTCACTTTGCAgGATGGAACTTCACACTACATGAAAGGAgtggttctttctttctgttatATAGTAATTTCTGCATGCTTTTTTGTTCACAGAACTCCAATAACTGACCAAAATGGTGTGGTAACTTTGGGGGGTAAACCACCTCTTGGTGCTATGGCCACATG 1343 0.4118 MESRHDLENNNHHHHHNGSGKNGVVQGFRTPEHVSSSIVRKKSDPVMVGSDNGFQVLRNFVANLQEVIFGTKLVVLFPAVPLAVAADFYSFGRPWIFALSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIAILALRKNKVHVVKFSLLGSILSNLLLVLGTSLLCGGLANLRKEQTYDRKQADVNSLLLLLGLLCHLLPLMFKYALEGSIYPIDTYTLQLSRASSIVMLLAYIAYIFFQLKTHRQLFDSQEEGEEEEKPVIGFWSAFTWLVGMTMIISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGIAMGSATQISMFVVPLSVLVAWTMGIQMDLDFNLLETGSLAFTIIVTAFTLQDGTSHYMKGVVLSFCYIVISACFFVHRTPITDQNGVVTLGGKPPLGAMAT 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00246 447 Pfam Sodium/calcium exchanger protein 95 252 IPR004837 GO:0016021|GO:0055085
Bva12g00246 447 Pfam Sodium/calcium exchanger protein 278 418 IPR004837 GO:0016021|GO:0055085
Bva12g00246 447 TIGRFAM cax: calcium/proton exchanger 78 421 IPR004798 GO:0006816|GO:0015369
Bva12g00246 447 MobiDBLite consensus disorder prediction 1 15 - -
Bva12g00246 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 3 432 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bva12g00246 447 TIGRFAM caca2: calcium/proton exchanger 59 421 - -
Bva12g00246 447 MobiDBLite consensus disorder prediction 1 26 - -
Bva12g00246 447 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 432 - -
Bva12g00246 447 Gene3D - 124 265 IPR044880 -
Bva12g00246 447 Gene3D - 270 422 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00246 Bva-Chr12 3995996 4001354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00246 8 429 Antiporters AT2G38170 64.419 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00246 K07300 - qsu:111994530 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00246 12 3995996 4001354 Bva12g00246 12 3995996 4001354 ECH