Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00245 ATGGGGAACAAAATTGCCCGCACCACACAAATTTCAGCTTCGGAATACTATCTTCATGAACTACCCTCTACTTATAATCTGGTCCTGAAGGAGGTTCTGGGTCGAGGCCGTTTCTTCAAGTCGATTCAATGCAAGCATGACGAGGGTTTGGTTCTGGTCAAGGTCTATTTCAAGCGTGGAGATTTCATCGATCTCACAGAGTACGAACGTCGTTTGTCCCAGATCAGAGATGTTTTCCGTGGCATTGATCACCCTCATGTGTGGCCTTTTCAGTTCTGGCAAGAAACAGATAAAGCAGCATACCTTTTGAGGCAACATTTCTTCCATAATCTGCATGATCGACTTAGTACTCGACCCTTTCTTAGTCTCGTTGAAAAGAAATGGTTGGCTTTTCAGTTGGTTGTAGCTGTGAAACAGAGCCACGATAAAGGAGTTTGTCATGGTGATATCAAGTGTGAGAATGTGCTGATTACATCCTGGAATTGGCTTTTCCTCGCGGATTTTGCATCTTTCAAACCCACTTACATTCCATATGATGACCCTtcggatttttcttttttctttgacacTGGTGGAAGAAGGCTTTGTTATCTTGCACCTGAGAGATTTTATGAACATGGAGGGGAGATGCAGGTGGCACAGGATGCCACCTTAAAGCCATCTATGGATATATTTTCTGTTGGGTGTGTAATTGCAGAACTTTTCCTCGAGGGACAACCACTCTTTGAACTTTCTCAACTCCTTGCTTATCGCAGAGGGCAATATGATCCTAGCCAACATCTTGAGAAAATACCTGATCCTGGAATCCGTAAGATGATACTACACATGATTCAATTAGACCCAGAGTCACGATTTTCTGCAGAAAGCTATCTAATGGAATATGCAGCAGTTGTGTTCCCAACCTACTTTTCACCATTTCTGCTTGATTTTTACTGCTGCTGGAGTCCCCTCCATTCAGATATGAGGGTTTTATTATGCCAAAGTGCTTTCCAGGAGATACTTAAACAAATGGACAATAAGTCACCTGAGCAGACAGGTGTTGCTTCTAGTGAAATTTTTGAAGAGATGGTTGCAAAGGgaaatgtgaattttttgaaGGACTCATTGATGAAGGGAGAGGAGATAGGAAAAAGTTTAGTTCATGATCATTATGAACTTCTTGGTGGTTTCAGCGGCCCACTGAGGGattctaaaagaaataatcattCATCTGCTCCCCAGCATGTAACAGGAAATGTACCCAATTCTACCTTTgtccaaaacataaaaaacttTCAATCTCCTGGTGAGCTGCTTCAAGCTATCTCCAATGCCTTTCGAGGAAATGATCACCCCTTtctgaaaaatatttcaatgaatgatttgaattcattaaTGAAAGGGTATGATAGTCAATCAGATACATTTGGCATGCCTTTTTTGCCTTTACCCAAGGATAGTATGAGATGTGAAGGCGTGGTTCTAATTACTTCTTTGCTCTGCTCCTGTGTACGCAATGTAAAGTTGCCTCATCGGAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCAGCTTTATATATTGATGATGAGGATCGCTTGCAGCGTGTTATTCCATATGTAATTGCAATGCTTTCAGATCCAGCAGCAATTGTGCGTTCTGCTGCTTTAGAGACTTTGTGTGACATTCTGCCCTTGATCCGTGATTTTCCTCCTAGTGATGCAAAGATATTTCCCGAGTACATACTTCCAATGCTTTCTATGCTTCCTGACGATCCTGAGGAAAGTGTGAGGATATGTTATGCCAGTAATATAGCTAAGCTAGCCTTAACTGCTTATGGATTCTTGATACACTCAATAAGCTTGAATGAGGCAGGTGTTCTTCATGAACTGAGTTCAACACAGAAGCCATTGATATCATCTAGTCAAACCTCTGGAAGATTGCAGAGGATTAATAGTGATGTGCAACTTGGGCAGCTGAGGAAGTCCATTGCAGAGGTTGTCCAAGAACTTGTTATGGGTCCCAAGCAGACACCAAACATCAGGAGGGCACTCCTTCAGGACATTGGTAGATTATGCTGGTTCTTTGGTCAAAGACAGAGCAATGACTTTCTCTTACCAATCCTCCCGGCTTTCCTGAATGATCAAGATGAGCAATTAAGGGCAgtattttatgaaaagattGTGTATGTCTGCTTCTTTGTGGGCCAAACGAGTGTAGAAGAATATCTTTTGCCTTATATTGAGCAGGCTTTAAGTGATACAACAGAGGCTGTAATTGTTAGAGCCTTGGATTGTTTGACCATTCTATGCAAAAGTGGGTTCTTTCGGAAGAGGATACTGCTTGAAATGATAGAGCATGCCTTTCCATTACTCTGTTATCCTGGTGAATGGGTACGAAGATCAGCTGTCTCTTTTATTGCTGCTAGCAGTGAGAGTTTGGGTGCTGTAGACTCGTATGTTTTCCTTGCTCCTGTTATACAACCTTTCCTCCGTAGACAGCCTGTATCCCTGACTTCTGAAAAGActattttttcatgtttaaaaCCGCCTGTCTCAAGACGAGTTTTCTATGAAGTCTTGGAGAAATCAAGGAGTTCAGACATGTTagaaagacaaagaaagataTGGTATAGTTCATCACCACAATCTAAACTATTGGAAATGGATTtgctaaagaaagaaatggaggAGTTGGACTCATTGGAGAGCTGGCCTGATAAGCAACTAGGTCCTGAGGGGCAACAATATATTGGCAATAGTTTACAACAGCCTGAGCTAACTGACTGTGACAAAACTGATGCAAAATTGAGAGATGTGGGAACCTTCATATATAACGATTGCAGTATGATGGGACATCAGAAGTTACAGTTCTCAGGTTTCATGTCACCACAGGTTAGTGGTGTAAACAGTTTGGCATATGAAAAGTCATCTGATGGCAtacctttttattcttttagtgTGGACCAAAGGGCAATGAGAAGTCCTCCCGCAGCATCTGATTCTCCATTACAAATGAATTCTCTAGGAATTAGTTCATCTTCCATGCCTTGGGTCAATCCAGTTAGTAAGTCCTTCAATTTGGCTAATTCATTTCCGGCACCAAAGCTTCTTTCTGGTTCTTTTAGCATCAACAATGGTTCTAAACAGTTCTATCGAGTTGTACATGAACCAGATGGCAAGGAAAATGAGTCATCTTATATTAATAGCAAATTTCAGGATGTGGGACTGTCTGCAAATATGAAAGGTGGTTCAGTTGCACTGGAAGAGGCATCCACCCAAACTGATCTGTCAGGAGTTCTATCTTTTGCTCGTACATCAATTCCTGATTCAGGTTGGAGGCCCCGTGGTGTGTTGGTTGCACATCTCCAAGAGCACCGTTCAGCTGTCAATGACATAGCCATTTCCACTGATCATAGCTTCTTTGTGAGTGCATCTGATGACTCTACAGTCAAAATATGGGATTCTAGAAAGCTAGAAAAAGACATTTCATTTAGATCAAGGCTAACTTATCACCTAGAGGGAAGCCGGGCACTCTGTGCAGCAATGCTTCGGGGTTCTGCTCAGGTAATCGTTGGAGCATGTGATGGATTAATCCATATGTTTTCTGTTGACCATATCTCCAGAGGTCTAGGAGATGTTGTTGAGAAGTATTCTGGTATTGCTGATATCACAAAGAAGGATATCAAGGAAGGTGCCATACTCAACCTTTTGAATTACCCTATGGATAATTATACTGTCATGTATAGCACCCAGAATTGTGGTATTCATCTGTGGGATACCAGgtcaaattcaaatacatGGACTCTAAAAGCTACTCCTGAGGAGGGCTATGTTTCTTCTCTGGTATTTGGGCCTTGTGGTAATTGGTTTGTATCAGGATCATCCAGGGGTGTGCTTACTCTTTGGGATCTGAGGTTTCTTATACCCGTGAACTCTTGGAAATATTCTCTTGCTTGCCCCATAGAAAAGATGTGTCTTTTTATTCCTCCTCCAAATGCTCCTCTATCTTCAACTGCAAGACCTCTTGTTTATGTAGCTGCAGGCTGCAATGAAGTTTCTCTTTGGAATGCGGAAAATGGGAGCTGCCACCAGGTATTAAGGGTGGCAAATTATGAAAGTGATGCAGAAACATCTGATCTTCCTTGGGCGTTGGCCAGACCGTCAAACAAAGCAACTTCTAAATCAGATCCGAGACGAAATGTGAATCCAAAGTATAGAGTGGATGAGCTAAATGCACCTCCTCCACATCTTCCTGGTATCCGTTCATTACTTCCCTTGCCTGGGGGTGATCTGTTGACTGGGGGTACTGATTTGAAGATACGCCGATGGGATCACTACAGTCCTGATAGAAGTTACTCTATATGTGGACCAAACTTAAAAGGAGTAGGAAATGATGCTCTTTATGAAACAAAATCTAGTTTTGGGGTGCAAGTTGTACAGGAAACAAGAAGACGTCCTCTTACAAGCAAGCTGACAACAAAGGCACTTCTTGCAGCTGCTGCCACTGATTCTGCTGGTTGCCACCGCGATTCCATCTTGTCTCTGGCTTCTGTCAAGTTAAACCAGAGAGTCCTCTTATCAAGCAGCAGAGATGGAGCTATCAAGGTTTGGAAGTG 4595 0.4089 MGNKIARTTQISASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFIDLTEYERRLSQIRDVFRGIDHPHVWPFQFWQETDKAAYLLRQHFFHNLHDRLSTRPFLSLVEKKWLAFQLVVAVKQSHDKGVCHGDIKCENVLITSWNWLFLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDATLKPSMDIFSVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDPGIRKMILHMIQLDPESRFSAESYLMEYAAVVFPTYFSPFLLDFYCCWSPLHSDMRVLLCQSAFQEILKQMDNKSPEQTGVASSEIFEEMVAKGNVNFLKDSLMKGEEIGKSLVHDHYELLGGFSGPLRDSKRNNHSSAPQHVTGNVPNSTFVQNIKNFQSPGELLQAISNAFRGNDHPFLKNISMNDLNSLMKGYDSQSDTFGMPFLPLPKDSMRCEGVVLITSLLCSCVRNVKLPHRRRAAVLLLKASALYIDDEDRLQRVIPYVIAMLSDPAAIVRSAALETLCDILPLIRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLNEAGVLHELSSTQKPLISSSQTSGRLQRINSDVQLGQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGRLCWFFGQRQSNDFLLPILPAFLNDQDEQLRAVFYEKIVYVCFFVGQTSVEEYLLPYIEQALSDTTEAVIVRALDCLTILCKSGFFRKRILLEMIEHAFPLLCYPGEWVRRSAVSFIAASSESLGAVDSYVFLAPVIQPFLRRQPVSLTSEKTIFSCLKPPVSRRVFYEVLEKSRSSDMLERQRKIWYSSSPQSKLLEMDLLKKEMEELDSLESWPDKQLGPEGQQYIGNSLQQPELTDCDKTDAKLRDVGTFIYNDCSMMGHQKLQFSGFMSPQVSGVNSLAYEKSSDGIPFYSFSVDQRAMRSPPAASDSPLQMNSLGISSSSMPWVNPVSKSFNLANSFPAPKLLSGSFSINNGSKQFYRVVHEPDGKENESSYINSKFQDVGLSANMKGGSVALEEASTQTDLSGVLSFARTSIPDSGWRPRGVLVAHLQEHRSAVNDIAISTDHSFFVSASDDSTVKIWDSRKLEKDISFRSRLTYHLEGSRALCAAMLRGSAQVIVGACDGLIHMFSVDHISRGLGDVVEKYSGIADITKKDIKEGAILNLLNYPMDNYTVMYSTQNCGIHLWDTRSNSNTWTLKATPEEGYVSSLVFGPCGNWFVSGSSRGVLTLWDLRFLIPVNSWKYSLACPIEKMCLFIPPPNAPLSSTARPLVYVAAGCNEVSLWNAENGSCHQVLRVANYESDAETSDLPWALARPSNKATSKSDPRRNVNPKYRVDELNAPPPHLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYSICGPNLKGVGNDALYETKSSFGVQVVQETRRRPLTSKLTTKALLAAAATDSAGCHRDSILSLASVKLNQRVLLSSSRDGAIKVWK 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00245 1531 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1498 1531 - -
Bva12g00245 1531 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00245 1531 ProSiteProfiles Trp-Asp (WD) repeats profile. 1115 1147 IPR001680 GO:0005515
Bva12g00245 1531 ProSiteProfiles HEAT repeat profile. 529 561 IPR021133 -
Bva12g00245 1531 CDD STKc_Vps15 16 303 - -
Bva12g00245 1531 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1531 IPR045162 GO:0004674|GO:0016236|GO:0045324
Bva12g00245 1531 SUPERFAMILY WD40 repeat-like 1112 1529 IPR036322 GO:0005515
Bva12g00245 1531 Pfam HEAT repeat 529 557 IPR000357 GO:0005515
Bva12g00245 1531 Gene3D - 610 827 IPR011989 -
Bva12g00245 1531 Gene3D Transferase(Phosphotransferase) domain 1 21 299 - -
Bva12g00245 1531 ProSiteProfiles Trp-Asp (WD) repeats profile. 1498 1531 IPR001680 GO:0005515
Bva12g00245 1531 Gene3D - 1222 1531 IPR015943 GO:0005515
Bva12g00245 1531 SUPERFAMILY ARM repeat 423 824 IPR016024 -
Bva12g00245 1531 MobiDBLite consensus disorder prediction 395 414 - -
Bva12g00245 1531 Pfam Protein kinase domain 29 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00245 1531 MobiDBLite consensus disorder prediction 396 414 - -
Bva12g00245 1531 SUPERFAMILY Protein kinase-like (PK-like) 26 292 IPR011009 -
Bva12g00245 1531 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1115 1147 - -
Bva12g00245 1531 SMART WD40_4 1396 1437 IPR001680 GO:0005515
Bva12g00245 1531 SMART WD40_4 1486 1531 IPR001680 GO:0005515
Bva12g00245 1531 SMART WD40_4 1108 1147 IPR001680 GO:0005515
Bva12g00245 1531 SMART WD40_4 1158 1195 IPR001680 GO:0005515
Bva12g00245 1531 SMART WD40_4 1255 1296 IPR001680 GO:0005515
Bva12g00245 1531 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00245 1531 Gene3D - 1044 1216 IPR015943 GO:0005515
Bva12g00245 1531 Gene3D - 474 609 IPR011989 -
Bva12g00245 1531 Pfam WD domain, G-beta repeat 1111 1147 IPR001680 GO:0005515
Bva12g00245 1531 ProSiteProfiles Trp-Asp (WD) repeats profile. 1264 1298 IPR001680 GO:0005515
Bva12g00245 1531 ProSiteProfiles HEAT repeat profile. 697 735 IPR021133 -
Bva12g00245 1531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00245 Bva-Chr12 3987162 3995277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00245 31 242 AGC Kinase Gene Family AT3G08730 25.792 1.25e-10 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Bva12g00245 Pkinase 8.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00245 K08333 - gmx:100818467 2545