Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00224 ATGGCCACCATTGCCACTTTCTTCCACAAGTTTCTCTCTTTGGTCGTCCTTCTTGTCCACCTTGGCTGCTTCATTTTCACCCCCGCTTGCGGCGGCGACGGTGCCGGAGAAGGACAAGAAAACCATAATCTAGACAAGCGATTgtcaaagaaaaggaaagtgtCCCCTGTGTCAACTCAAGAGTCCACTTCCACTTCTTCCCATCACAAGTTCAAGACCCACAGggccatttcttcttcttggacTTTTATCAAACACCTTTTCCGCACCAGGTCCTGCAAGACAATCACAACCTCCCAAACATCACCGCCTCACGCTCAATCCACCGCTACATCTTCGTTGACATCCGCGAGAACATCCCAGCAATCCTTGGTCTCTCTCGTCCAACCCGAATCGCATTTGCTGGATCATCCACGTAAAAACCCACCAGGGTCATGCCCAGAATCCGAAATCTCCGCAGACAACAACCATTTCCTCCCCCTCCGTAACGATATTTTCCCCTGCACCGCTTGCGGTGAGATTTTCCAGAAACCCCAGATTCTCGAACAACACCAGGCGATTAAACACGCAGTATCAGAGCTCACAGAAACCGATGCGGGTCACAATATAGTCCGAATCATATTCAAGTCGGGTTGGACGAATACCCAGAAGTGCCCAAAGATAACCCGGATTCTAAAGATCCATAACAGCCCGAAAATTCTCTCCAAGTTCGAAGAGTACAGGGAATCGGTGAAAACCAAGGCAGCTCGAAACGGCGCCGTAAATAAACGAGACGAAAGGTGCATCGCTGATGGCAACGAGCTCATGCGGTTTCACTGCTCCACTTTTCTCTGCGATTTGGGACTCAATGGGGATTCTGGTATTTGTGCTGGACAATACTGTAATATCTGCGGGATCATAAACTCTGGATTCTCACCCAAGTTGGACGGAATTTCCACGCTATCGACAAGCTGGAGGGCCCACGTGGCAATACCGGAGGAGATCGAGGAGGAGTTCAAGTTCATGAACGTGAAGCGGGCGATGCTGGTGTGTCGGGTGATCGCGGGTCGGGTCGGGTGTGACACCGATGACGTGGACAAAGAAGACGCGGGTTATGATTCGGTGATGGCGCGTGGAGGAACTGGTGTTTGTACCCGTTTGGATGAAGAGGAGCTATTGGTGTTTAATCCAAGGGCTGTTCTTCCTTGCTTTGTGATTGTGTATACCGTGTG 1211 0.4905 MATIATFFHKFLSLVVLLVHLGCFIFTPACGGDGAGEGQENHNLDKRLSKKRKVSPVSTQESTSTSSHHKFKTHRAISSSWTFIKHLFRTRSCKTITTSQTSPPHAQSTATSSLTSARTSQQSLVSLVQPESHLLDHPRKNPPGSCPESEISADNNHFLPLRNDIFPCTACGEIFQKPQILEQHQAIKHAVSELTETDAGHNIVRIIFKSGWTNTQKCPKITRILKIHNSPKILSKFEEYRESVKTKAARNGAVNKRDERCIADGNELMRFHCSTFLCDLGLNGDSGICAGQYCNICGIINSGFSPKLDGISTLSTSWRAHVAIPEEIEEEFKFMNVKRAMLVCRVIAGRVGCDTDDVDKEDAGYDSVMARGGTGVCTRLDEEELLVFNPRAVLPCFVIVYTV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00224 403 MobiDBLite consensus disorder prediction 37 71 - -
Bva12g00224 403 MobiDBLite consensus disorder prediction 95 120 - -
Bva12g00224 403 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 402 - -
Bva12g00224 403 SUPERFAMILY ADP-ribosylation 191 402 - -
Bva12g00224 403 PANTHER NUCLEIC ACID BINDING PROTEIN 3 402 - -
Bva12g00224 403 Gene3D - 189 402 - -
Bva12g00224 403 MobiDBLite consensus disorder prediction 39 54 - -
Bva12g00224 403 ProSitePatterns Zinc finger C2H2 type domain signature. 168 189 IPR013087 -
Bva12g00224 403 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 194 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00224 Bva-Chr12 3827054 3829099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00224 81 403 C2H2 Transcription Factor Family AT2G29660 57.357 6.23e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00224 - - gmx:100785244 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00224 12 3827054 3829099 Bva12g00224 12 3827054 3829099 ECH