Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00207 aTGAAGTGGGAAATGGAAATCCTCTCACCAGCACCATACATACCCAACACCAATTGGGGTTTCGAGGAAAACTACAGCAGAAACTCAAAATGGACAGCTGCAGAAAACAAACTGTTTGAGAATGCTCTTGCAGTTTACGACAAGGATTCGCCGGATCGGTGGCACAAGGTGGCGGCGATGATTCCGGGGAAGACGGTGAACGATGTGATGAAGCAGTATAAAGAACTTGAAGTAGATGTTAGTAATATAGAAGCCGGTTTGGTTCCAATTCCCGTATATAACCCTGCTTCACCTTTCACTTTAGATTGGGTTAACACTTCTGGGTATGTTGGGTTTAGGGGTATTGGTGGGAAGAGATCCTCATCAGGGAGAGCACCTGAgcaggaaaggaagaaaggggTTCCATGGACAGAAGACGAGCATAAaTTGTTTCTACTGGGTTTGAAGAAATATGGGAAAGGTGATTGGAGAAATATCTCACGCAATTTTGTTATTACTCGAACTCCAACTCAAGTGGCAAGCCATGCTCAGAAATACTTCATAAGACAACTCTCAGGAGGCAAGGACAAGAGAAGAGCTAGCATCCATGACATAACAACAGTTAACCTAAATGACACCACAAGAACTCCTTCTCTGGCCAAAGAGGGCAGCGGCTGTGGTGGCCTGGGCGGCGGCCCGATGCTTTCCCACCACCAGCACCACCACCCTCATTCTCCGGCCGCCACACCCAGAGCACAATTCCAATGGAACCAGGCAAATGCAGCAGTGGCCATGGGTGGACATGAAAAAATGTACATGTCTACTTATGGGGTTAACTCCTATGGGCAAAATCTGCATAGAAATGCTGCTCTTCATGACTCTTCTTTCTTACCACCTCAGAATCAAAACATGGTTTTCCAAACCCAAAGCTATTCCCATGCATG 923 0.454 MKWEMEILSPAPYIPNTNWGFEENYSRNSKWTAAENKLFENALAVYDKDSPDRWHKVAAMIPGKTVNDVMKQYKELEVDVSNIEAGLVPIPVYNPASPFTLDWVNTSGYVGFRGIGGKRSSSGRAPEQERKKGVPWTEDEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLNDTTRTPSLAKEGSGCGGLGGGPMLSHHQHHHPHSPAATPRAQFQWNQANAAVAMGGHEKMYMSTYGVNSYGQNLHRNAALHDSSFLPPQNQNMVFQTQSYSHA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00207 307 PANTHER MYB TRANSCRIPTION FACTOR MYB51 1 286 - -
Bva12g00207 307 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 286 IPR043363 -
Bva12g00207 307 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Bva12g00207 307 Pfam Myb-like DNA-binding domain 29 74 IPR001005 -
Bva12g00207 307 ProSiteProfiles Myb-like domain profile. 23 77 IPR001005 -
Bva12g00207 307 SUPERFAMILY Homeodomain-like 25 76 IPR009057 -
Bva12g00207 307 MobiDBLite consensus disorder prediction 223 242 - -
Bva12g00207 307 MobiDBLite consensus disorder prediction 115 134 - -
Bva12g00207 307 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Bva12g00207 307 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Bva12g00207 307 CDD SANT 135 180 IPR001005 -
Bva12g00207 307 SUPERFAMILY Homeodomain-like 129 183 IPR009057 -
Bva12g00207 307 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Bva12g00207 307 Gene3D - 23 90 - -
Bva12g00207 307 SMART sant 27 79 IPR001005 -
Bva12g00207 307 SMART sant 132 182 IPR001005 -
Bva12g00207 307 CDD SANT 30 76 IPR001005 -
Bva12g00207 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Bva12g00207 307 Gene3D - 134 184 - -
Bva12g00207 307 ProSiteProfiles SANT domain profile. 26 81 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00207 Bva-Chr12 3644460 3646483 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva12g00207 Myb_DNA-binding 5.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00207 - - gmx:100784163 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00207 12 3644460 3646483 Bva12g00207 12 3644460 3646483 ECH
Bva12g00207 12 3644460 3646483 Bva12g01660 12 14061856 14064031 ECH
Bva02g00219 02 3477289 3479733 Bva12g00207 12 3644460 3646483 ECH
Bva01g00064 01 508029 510082 Bva12g00207 12 3644460 3646483 ECH