Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00196 ATGATTATGCCAAAACCAGGATCAGAAAACGTATTACCAGATCTGCCCATTGAATTCAAGAACAGGATAAGAGAATTGGAGGGCTATGATGTAAAATTTCTGATGCAGAAACAGCTTTATGATACTGATATCAGCATGAACAACAATCGCCTCTCAATGCCGCATAGCCAAATTCACTGTGAATTTTtgaatgcaaatgagaagGCAATCCTAAATGACCGTGAAGGGGATAGAAGGCTACCATGTGCTATAGAAGTGGTGGTTTTGGACCCTTATCTTAGGCTGTTCAATCTGTCTTTGAAAAGATGGGGAATGGGAAGTGTATCTATCTACAATCTGGTGAAGGATTGGAAGAGAGTTGTAAAAGAGAATCATTTACAGAGTGGTGATTACATGGAGATCTGGTCATTTAGGGTCCATGGAAATTTATACCTTTTGTTGAATTGTAAAAAGGTAATTTTACAGTA 467 0.3683 MIMPKPGSENVLPDLPIEFKNRIRELEGYDVKFLMQKQLYDTDISMNNNRLSMPHSQIHCEFLNANEKAILNDREGDRRLPCAIEVVVLDPYLRLFNLSLKRWGMGSVSIYNLVKDWKRVVKENHLQSGDYMEIWSFRVHGNLYLLLNCKKVILQ 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00196 155 SUPERFAMILY DNA-binding pseudobarrel domain 35 145 IPR015300 -
Bva12g00196 155 Gene3D - 18 152 IPR015300 -
Bva12g00196 155 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 12 151 IPR005508 GO:0003677
Bva12g00196 155 PANTHER DUF313 DOMAIN PROTEIN 12 151 - -
Bva12g00196 155 Pfam B3 domain-containing protein At2g31720-like 22 123 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00196 Bva-Chr12 3546333 3546800 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00196 23 154 B3 DNA Binding Superfamily AT1G05930 29.630 1.27e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00196 - - gmx:102663703 145.976