Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00188 ATGGATTTCCAAGGCAAAAGGGTAACCCAAAAGAGACACTGCAATAGTGAAGAACGAGTGGAAATTGAAAAGCTTCAACCTTTGAAGAAACAGCGAAGGATGATTATGCCAAAACCAGGATCAGAAGACGTATTACCAGATTTGCCCATTGAATTCAAGAACATGATAAGAGAATTGGAGGGCTGTGATGTGAAATTTCTGATGCAAAAACAGCTTTATGATACTGATATCAGCATGAACAACAATCGCCTCTCAATGCCACATAGCCAAATTCACTGTGAATTTTTGAATGCAAATGAGAAAGCAATCCTAAATGAACGTGAAAGGGATAGAAGGCTACCATGTGGTATAGAAGTGGTGGTTTTGGACCCTTGCCTTAGGCTGTTCAATCTGTCCTTGAAAAGATGGGGAATGGGAAGTGTATCTATCTACAATCTGGTGAAGAATTGGAAGAGAGTTGTAAAAGAGAATCATTTACAGAGTGGTGATTACATGGAGATCTGGTCATTTAGGGTCCATGGAAATTTATACCTTTTGTTGAAttgtaaaaaagtaattttacagTA 566 0.3746 MDFQGKRVTQKRHCNSEERVEIEKLQPLKKQRRMIMPKPGSEDVLPDLPIEFKNMIRELEGCDVKFLMQKQLYDTDISMNNNRLSMPHSQIHCEFLNANEKAILNERERDRRLPCGIEVVVLDPCLRLFNLSLKRWGMGSVSIYNLVKNWKRVVKENHLQSGDYMEIWSFRVHGNLYLLLNCKKVILQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00188 188 Gene3D - 51 185 IPR015300 -
Bva12g00188 188 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 6 184 IPR005508 GO:0003677
Bva12g00188 188 Pfam B3 domain-containing protein At2g31720-like 54 156 IPR005508 GO:0003677
Bva12g00188 188 PANTHER DUF313 DOMAIN PROTEIN 6 184 - -
Bva12g00188 188 SUPERFAMILY DNA-binding pseudobarrel domain 67 178 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00188 Bva-Chr12 3490816 3491382 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00188 52 187 B3 DNA Binding Superfamily AT1G05930 28.986 4.14e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00188 - - gmx:102663171 154.066