Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00187 ATGGCCAAAGAATTGGAGAGCAAGAAGGGTGAGAAAGCTATTTTTAGAGATGGGTATTGTCCAATGTTGTCTCCATTGGTAGATGTAGGGATGGAGGAAAGATCTGTTGCTGATACCCCCGACTCCAGATTGGAACCTTTGAAGCAAGACAAATGCTCctctttgaatattttatcagAGGTTGCAGAATATTGTATGAGCAAAATGAATCAGAGCGTTGTCAGTGAGGTTCACTTGGAACCAGAATTGGTTCAAGAGCCAAAATCAATGGCTAACCTTCGACCATGTTCACTTTATGGGTTTGGATCACCGTTGGACATCTTAGCAGATGCGGCAGAAATTTgccaatttgaagaaaatcaaagcTCTCTCCCTTTCGTTACAGTACCCAAGAAGAGAAGGTCCTCGGTTCATAAAGCCAGAACCAAAGTGGTTTTCTCAATGGATTTCCAATGCAAGAGGGTAACCCAGAAGAGATGCCGCAATAAAGAAGAACCAATGGAAGGTGAAAAAGTTGAaccttcaaagaaaaagagaaagatgaatATGCCGAAACCAGAATTGGAAAAGTCACCACCTGATTTATCCATTGAATTCAAGGATATGATAAGAAAATTGGAGGGTactgatttaaaatttttgatgcaGAAATATCTTTATGGTACTGATATCAGTATGAACAACAATCGCCTTTCCATGCCAAAGAGCCAAATTCAGTGTGAATTTTTGAGTGAAAATGAGAAGGCAATTCTTGATGAAcgtgaaggtgataaaggaaGACCTTCTGGTGTAGAAGTGGTGCTTTTGGATCAATGCCTTAGGGAGTTTAAAATCTCTTTGAAAAAATGGGACATGAGAAGTGTTTCTATCTACAACTTAGTTAGGGATTGGAAACgagttataaaagaaaacgaTCTTCAAAAGGGTGATCATATTCAGCTCTGGTCTTATAGGGTCCATGGAAACTTATGCCTTTTTTTGAATTGTAAAAAGTG 995 0.3497 MAKELESKKGEKAIFRDGYCPMLSPLVDVGMEERSVADTPDSRLEPLKQDKCSSLNILSEVAEYCMSKMNQSVVSEVHLEPELVQEPKSMANLRPCSLYGFGSPLDILADAAEICQFEENQSSLPFVTVPKKRRSSVHKARTKVVFSMDFQCKRVTQKRCRNKEEPMEGEKVEPSKKKRKMNMPKPELEKSPPDLSIEFKDMIRKLEGTDLKFLMQKYLYGTDISMNNNRLSMPKSQIQCEFLSENEKAILDEREGDKGRPSGVEVVLLDQCLREFKISLKKWDMRSVSIYNLVRDWKRVIKENDLQKGDHIQLWSYRVHGNLCLFLNCKK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00187 331 SUPERFAMILY DNA-binding pseudobarrel domain 214 326 IPR015300 -
Bva12g00187 331 PANTHER DUF313 DOMAIN PROTEIN 116 328 - -
Bva12g00187 331 Gene3D - 204 331 IPR015300 -
Bva12g00187 331 Pfam B3 domain-containing protein At2g31720-like 201 303 IPR005508 GO:0003677
Bva12g00187 331 MobiDBLite consensus disorder prediction 161 192 - -
Bva12g00187 331 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 116 328 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00187 Bva-Chr12 3460363 3461358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00187 199 325 B3 DNA Binding Superfamily AT1G05930 31.783 9.26e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00187 - - gmx:102669231 157.147