Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00183 atggGATCAGTTTACAGAGGAGTGTATTTATCGAACACTCGAACTATCAAGTTCAACGCCAGGATTTGCTACAGGTACACTAGGCTTTCTCTGGGCTCATTCAAACATGCAGCCGAAGCAGCTTTGGCTTATGACAGAGCTGCAATGAAACTTCATGGGATAAATGTTTCTCTCAACTTCCCTGGACTCTACACTGAAGCAGAAACCTGGTTTCAGAGTTTGAAATCAGAGGTTGAGATTGTTCAGATGATCACCAATCATACGTATGCATCAGAATTGGCGTCCTTTGTTTCTGGGCTCAATCATATTGCAGTACGTGCTCATGTTAACAATGACATCGTTCATCAGCTGTTGTTTTATGTTAACCTAATCTGTGATGAAGTGCGTCACCGGCTGATTTTCCTCCCACAAGCACTTGCTCTCCATCATTTTCCTGAGATCGCCGGGTTAATGCCTGGTGATCCCAATACAATCAGGAAAATGAACATTCACTTTTTGGACAGAAGGAGGTTTTGTTCATGGAGCTTTGAGTTCTGTTACCTGAAGAACATCCGGACTTTCGCGATCACTGGAGAGATGGATAGCTTCTTTCGGCTGAATAACTTGCATGTGGGTGATACAGTTCTGTTCTATAAGTATTACCATGTAGAGGCTGAGAGGAACAGAACCCTATACATGATTGACTGCATCCAAAGGCCAGCTGTGATGCTGTTTGGTGTCCAAATAAGTTG 731 0.4309 MGSVYRGVYLSNTRTIKFNARICYRYTRLSLGSFKHAAEAALAYDRAAMKLHGINVSLNFPGLYTEAETWFQSLKSEVEIVQMITNHTYASELASFVSGLNHIAVRAHVNNDIVHQLLFYVNLICDEVRHRLIFLPQALALHHFPEIAGLMPGDPNTIRKMNIHFLDRRRFCSWSFEFCYLKNIRTFAITGEMDSFFRLNNLHVGDTVLFYKYYHVEAERNRTLYMIDCIQRPAVMLFGVQIS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00183 243 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 3 230 IPR044800 GO:0003700
Bva12g00183 243 CDD AP2 3 61 IPR001471 GO:0003700|GO:0006355
Bva12g00183 243 PANTHER PROTEIN RAV1, PUTATIVE-RELATED 3 230 - -
Bva12g00183 243 Gene3D - 116 234 IPR015300 -
Bva12g00183 243 SUPERFAMILY DNA-binding pseudobarrel domain 118 212 IPR015300 -
Bva12g00183 243 SMART rav1_2 4 67 IPR001471 GO:0003700|GO:0006355
Bva12g00183 243 Gene3D AP2/ERF domain 4 62 IPR036955 GO:0003700|GO:0006355
Bva12g00183 243 ProSiteProfiles AP2/ERF domain profile. 4 61 IPR001471 GO:0003700|GO:0006355
Bva12g00183 243 SUPERFAMILY DNA-binding domain 3 61 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00183 Bva-Chr12 3408907 3409638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00183 3 242 RAV Transcription Factor Family AT1G68840 29.008 2.38e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00183 K09287 - rcu:8277465 120.168