Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00174 ATGCAGCTGCCGCCATCATCACCGTCGCTGGCAACCCCATCACAGTCGCAACCAAGGTTCACCACGAACTTGAACAACCAGAAACTGCTCACCAAATTAGCAGAGGATGTGCAAAACAGGAACTTGTCTGAGTTCAAGAATGAAGTATCCACCTTGTCAAAAACCGAGCATCTGAATCTTCTGAGACTGTATGGATATTTGGAGAATCAAGACGAAAAGATAATCATTGTTGAATACGTAGCTAATGGGACACTGTGGGAACATTTAGACGATATGTATTGCAGAAAAAAGTGTATACGAGGGGATGAACTAGAAATGGGTGAGCGTCTAGACGTAGCAATCGACGTTGCTCATGCAGTTACCTACCTTCATATGTATGCAGATCATCAGATAATCCATAGAGACATCAAAGCATCAAACTTCCTAATTACAGAGAAACTTAGGGGCAAAGTTGCAGACTTTGGATTGGCGTGTTTGGCTGAAGAAGTCCATGCTGCTACACATATTTCAACTCATTA 518 0.4266 MQLPPSSPSLATPSQSQPRFTTNLNNQKLLTKLAEDVQNRNLSEFKNEVSTLSKTEHLNLLRLYGYLENQDEKIIIVEYVANGTLWEHLDDMYCRKKCIRGDELEMGERLDVAIDVAHAVTYLHMYADHQIIHRDIKASNFLITEKLRGKVADFGLACLAEEVHAATHISTH 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00174 172 Gene3D Transferase(Phosphotransferase) domain 1 81 172 - -
Bva12g00174 172 SMART serkin_6 24 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00174 172 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00174 172 Pfam Protein tyrosine and serine/threonine kinase 29 160 IPR001245 GO:0004672|GO:0006468
Bva12g00174 172 PANTHER RECEPTOR-LIKE PROTEIN 55 35 171 - -
Bva12g00174 172 Gene3D Phosphorylase Kinase; domain 1 20 80 - -
Bva12g00174 172 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 35 171 - -
Bva12g00174 172 SUPERFAMILY Protein kinase-like (PK-like) 39 165 IPR011009 -
Bva12g00174 172 MobiDBLite consensus disorder prediction 1 21 - -
Bva12g00174 172 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00174 Bva-Chr12 3322072 3324769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00174 25 169 Receptor kinase-like Gene Family AT5G49760 37.838 2.72e-25 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Bva12g00174 PK_Tyr_Ser-Thr 8.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00174 - - gmx:100819818 189.119