Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00118 ATGGTACCCAGATTCGGTTTGCACCTTTTCCTCTGTCTCTCAACatctattctttttgttgCAGAATCAAAGTGTAGCAAAGGTTGTGACTTGGCTTTAGCTTCCTATTATGATGGGGAGAGTTCAGACAATCTCACATACATTGCCCAGATTATGCAATCCCCCGTTCTGTCGTCGGAAGATGATATTGTTAAATTCAACAAAGACACAATACCCAATGAAGATTCGGTACCATCCTTTCTAAGGATAAACGTTCCATTCCCTTGTGATTGCATTGGAGGCGAGTTCTTGGGTCATATTTTTCAGTACTCGCTTAGTTTTGGGGAAACCTATACCTCAATTGCTAGGGGgaacttttcaaaattgaccacTGTTGAGTGGTTGGAGAAGTTCAATAGCTACTCACAAACTGAGATCCCAGATTCTGGGTATATTAATGTCACGGTTAATTGCTCTTGTGGGAATGAAGAAGTTTCAAAGGAATATGGGTTGTTCATCACATACCCACTCAGACCTGGAGATAACTTGGAATCAATTGCAAAAGACATGAAATTAGATAAGGGGTTGCTGCAGAGGTACAATCCGGGTGTGAATTTCAGCCGAGGGAGTGGTCTGGTTTTTATTCCTGGGAAAGATCAAAATGGTAGCTATGTGCCCCTGAAGCCTAGCACTAAAGGTCTATCACATAGGGATATTGCTGGAATATCGGTTGGAGTAGTAGCAGGGATTATATTATTGGCTCTTTGTATCTATGTTGGATTTTACCTAAGGAATAAGGAACACAAGGGAAAACAGCTTTCAGATGATTCCAAAGTACTCTCCGCTCAAGATGAACTCTCTGGAAATATTGAAACTCGAAGTTTAGAATTGGGTGGTCCTGTTGCTCCTGGTGCCACAGGCATCAGTGTTATTAGAGTAAACAAGTCAGTGGAGTTTTCATATGAAGAGCTAGCCAATGCCACAAATAACTTCAATATGGCAAATAAAATTGGTCAAGGTGGTTTTGGGGCTGTCTACTATGCAGAGCTGAGAGGCGAGAAAGTTGCAATCAAGAAAATGGATATTCAAGCATCTCAACAATTCCTTGCTGAATTGAGAGTTTTAACACATGTTCATCACCTGAACCTGGTGCGCTTGATTGGATATTGTATTGaaaactctctttttcttgtctaTGAATACATTGAGAATGGAAACTTGAGCCAACACCTACATGGTTCAGGGAGAGAACCTCTGCCATGGACTACCCGTGTGCAAATTGCTCTCGATTCAGCCACAGGTCTTGAATATATTCACGAGCATACGAAGCCCGTATATATCCATCGTGACATAAAGCCAGAAAACATATTACTAGACAAAAACTTCCAGGGAAAGATATCAGATTTTGGATTGGCCAAACTGAAAGAAGTTGGAAGCTCCACACTTTTCACCAATAGACTTGTGGGAACATTGGGATACTTGCCACTAGAATATGTTCAACATGGTCATGTTTCTCCCAAATTGGATGTATATGCTTTTGGAATTGTTCTATATGAACTAATTTCCGCTAAAGAAGCCACCTTCAGGAGCAGTGAATTTAATGAAGGACTACATGGCCTTGTAGCTTTGTTTGATAGAGTTCTTGATCAGCCTAATCCTAGAGAAGGTCTTCAAAAATTGGTGGACCCGAGGCTTGGAGAAAGCTACCCGATTGATTCAGTTCTCAAGATGGCTCAACTGGCCCAAGCATGTACACAAGCAGATCCACAACAACGTCCAAGCATGAAAATTGTTGGGGTTGCTCTTATGACACTCTCTTCTACAACTGAGAATGTGGATGTTAGCTCCTTCTACAGAAATCCAACCCTTGCCAATCTAATGTCTGGAAGATA 1871 0.4035 MVPRFGLHLFLCLSTSILFVAESKCSKGCDLALASYYDGESSDNLTYIAQIMQSPVLSSEDDIVKFNKDTIPNEDSVPSFLRINVPFPCDCIGGEFLGHIFQYSLSFGETYTSIARGNFSKLTTVEWLEKFNSYSQTEIPDSGYINVTVNCSCGNEEVSKEYGLFITYPLRPGDNLESIAKDMKLDKGLLQRYNPGVNFSRGSGLVFIPGKDQNGSYVPLKPSTKGLSHRDIAGISVGVVAGIILLALCIYVGFYLRNKEHKGKQLSDDSKVLSAQDELSGNIETRSLELGGPVAPGATGISVIRVNKSVEFSYEELANATNNFNMANKIGQGGFGAVYYAELRGEKVAIKKMDIQASQQFLAELRVLTHVHHLNLVRLIGYCIENSLFLVYEYIENGNLSQHLHGSGREPLPWTTRVQIALDSATGLEYIHEHTKPVYIHRDIKPENILLDKNFQGKISDFGLAKLKEVGSSTLFTNRLVGTLGYLPLEYVQHGHVSPKLDVYAFGIVLYELISAKEATFRSSEFNEGLHGLVALFDRVLDQPNPREGLQKLVDPRLGESYPIDSVLKMAQLAQACTQADPQQRPSMKIVGVALMTLSSTTENVDVSSFYRNPTLANLMSGR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00118 623 PANTHER LYSM RECEPTOR KINASE 1B 7 623 - -
Bva12g00118 623 Pfam Protein tyrosine and serine/threonine kinase 325 591 IPR001245 GO:0004672|GO:0006468
Bva12g00118 623 SMART serkin_6 324 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00118 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Bva12g00118 623 Gene3D Phosphorylase Kinase; domain 1 299 394 - -
Bva12g00118 623 SUPERFAMILY Protein kinase-like (PK-like) 305 591 IPR011009 -
Bva12g00118 623 ProSiteProfiles Protein kinase domain profile. 324 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00118 623 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 623 IPR044812 GO:0019199|GO:0045087
Bva12g00118 623 Gene3D Transferase(Phosphotransferase) domain 1 395 613 - -
Bva12g00118 623 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00118 Bva-Chr12 2501254 2508360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00118 11 623 Receptor kinase-like Gene Family AT3G21630 54.120 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva12g00118 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00118 - K13429 gmx:100803042 796.964