Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00114 ATGGGTGGAATCTGTTCTAGGAAGAGATACCAACAAGTTGTTGAAGATGGTTTACGCAGGGGAGTCTCTGGAAGGAATCCATGCGATATGATCAGCTCCGTGATGTGGTGGCCAAGCGCAAACCAGGGATATCGAGGCAAACAACCGAAAGGTGAAGCTGATCTTCTCCTGCTTTCATCAAGCTATGGTGATGGAGTTTGCTATGTTGAGACAATGAATCTTGATGGAGaaacaaatctaaaattaaagcATGCTTTGGAGGTAACAGCTCAACTTCATGATGAAAAATCCCTTCAAAAGTGTAGGGCAATGGTCAAATGTGAGGATCCTAATGAAAATCTATACTCATTCATTGGAACCCTGCACTATGAAGGCAAAGAATATCCACTTTCCTTACAACAACTTCTCTTAAGAGATTCAAAGATGAAAAACACTGAATATATCTATGGTGTTGTTGTCTTTACCGGCCATGATACTAAAGTGATGCAGAATGCAACAGATCGTCCATCCAAGAGAAgtaaaattgagagaaaaatggaTAAGATAATCTACATCCTTTTCAGCACCTTGGTTTTGATATCCTTTATTGGTTCAGTCTTTTTTGGCATTGAAACTAAAAGGGACATTAGTGCTGGTAATCACAGAAGATGGTATCTTCATCCAGACAATACAACGGTGTTTTATGACCCTACAAGGCCAACACTTGCTgcaattcttcattttttaactGCCCTTATGTTGTATGGTTATCTAATTCCTATATCACTTTATGTCTCCATGGAAATTGTGAAAGTTTTGCAGAGTATTTTCATTAACCATGATTTGGAAATGTATTATGAAGAAACAGATAGGCCAGCTCGTGCACGTACGTCTAATTTGAATGAGGAACTTGGCCAGATTGATACAGTATTGTCTGACAAAACGGGTACTTTGACATGCAACTCTATGGAGTTTATTAAATGTTCCATAGCTGGCACTCCATATGGTCGTGGTATGACAGAAGTAGAGAAGGCACTTGTGACGAGAGGGAGCCATGGGGAAACTGAAATTGATGGTGTGTCATCTGATGTCAGAATATTGACGAAGAGGACTCCAGGTATCATACAGAAATTCTTTCGAGTTTTAGCACTTTGCCATACTGCTATTCCTGATGTAGATGAAGAATTAGGAGAAATTTCTTATGAAGCTGAGTCACCAGATGAAGCAGCTTTTGTTATAGCTGCAAGAGAACTtggttttgagtttttttcAAGGACACAAACAAGCATATCATTGCATGAATTAGATCACGAGAGTGGAAAAAAGGTTGACAGGGTGTACGAGCTTCTTCATGTCTTAGAGTTCAGCAGTTCTCGCAAAAGAATGTCAGTTATTGTAAGATATGAGGAAAATCATTTGTTGCTCTTATGCAAGGGTGCAGACAGTGTTATGTTCGAAAGGCTCTCACAAGATGGAAGACAGTTTGAGGCTGAGACCAAAGCTCATATCAAAAGCTATGCTGAGGCAGGTTTAAGAACTTTGGCAATCACATACCCTGAACTTGATGAAAGAGAATATAAGTTGTGGGAAGGGGAGTTTTTAAAGGCCAAAGCTTCTGTAGTTGCAGACTA 1610 0.3826 MGGICSRKRYQQVVEDGLRRGVSGRNPCDMISSVMWWPSANQGYRGKQPKGEADLLLLSSSYGDGVCYVETMNLDGETNLKLKHALEVTAQLHDEKSLQKCRAMVKCEDPNENLYSFIGTLHYEGKEYPLSLQQLLLRDSKMKNTEYIYGVVVFTGHDTKVMQNATDRPSKRSKIERKMDKIIYILFSTLVLISFIGSVFFGIETKRDISAGNHRRWYLHPDNTTVFYDPTRPTLAAILHFLTALMLYGYLIPISLYVSMEIVKVLQSIFINHDLEMYYEETDRPARARTSNLNEELGQIDTVLSDKTGTLTCNSMEFIKCSIAGTPYGRGMTEVEKALVTRGSHGETEIDGVSSDVRILTKRTPGIIQKFFRVLALCHTAIPDVDEELGEISYEAESPDEAAFVIAARELGFEFFSRTQTSISLHELDHESGKKVDRVYELLHVLEFSSSRKRMSVIVRYEENHLLLLCKGADSVMFERLSQDGRQFEAETKAHIKSYAEAGLRTLAITYPELDEREYKLWEGEFLKAKASVVAD 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00114 536 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 53 533 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bva12g00114 536 ProSitePatterns E1-E2 ATPases phosphorylation site. 306 312 IPR018303 -
Bva12g00114 536 SUPERFAMILY Calcium ATPase, transduction domain A 53 165 IPR008250 -
Bva12g00114 536 Gene3D - 308 533 IPR023299 GO:0000166
Bva12g00114 536 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 53 535 - -
Bva12g00114 536 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 53 535 - -
Bva12g00114 536 Pfam Cation transport ATPase (P-type) 395 482 - -
Bva12g00114 536 Gene3D - 50 167 - -
Bva12g00114 536 SUPERFAMILY Calcium ATPase, transmembrane domain M 93 298 IPR023298 -
Bva12g00114 536 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 311 516 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00114 Bva-Chr12 2461975 2464845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00114 72 536 Primary Pumps ATPases AT3G27870 72.279 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00114 K01530 - gmx:100817020 800.431