Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00081 ATGTTATACAAGGGAAGGAAAGCCACTGCTACGAACTTTCATCGATCACATAACTTGCAACGGATAACTGCTATTTTTTGTGGACGCTTCAGTCAAATATTCTCCTGCTTCACAGTTTATGGCTATATTGTGCATCCAACAGATGAGGAAATCTACAAAGGAATTTATGCAAAAGAATtccaaaatttagaaaatgattGGGAGTTCGAGGAAAACCTTGTTAATTTCACGATTGATCCGTTTTTTCAAGCTGATGCAGACCCAGTTAATTTTGCTCCTCAAACATGGGTCACCTCTGATGTAGATGGGTTTGTTCCATCCTGGACTGTGAGCCCTGCAGAGGTTGATTTAGATGTGCCATTTTCAACTATGTCTTCTGCAGCTGATTCTTCCCTAGAAAAGAATGACTTTTCAGAAACTGTCCAGAGCATAAGCCAAGTACTTATGGAAGAGAATCTCGGTCATAAGCAATCCATGTTTTATGATCCATTTAGCCTGCAAGTCACAGAGAAGTCTTTTTATGATGCTCTTAAAGAAAACCATACTTCTTCCCCCAGTCAGCGCCCCCTCTACATTTATGAAAATGTAGAGAGACCGGATGTTGATGGTTCTGACAGTAATGCTAGCAACAGCAACAACTCAATTAATATTCCATGGCATGGGAAACCTCATAATCCTAAACCATCTTCATTGGGTACCCCTATTTCGGCTGATTATTCTTTCAAGTCCAATTTGCAATCCAATTCCCCAAAGCCCTGTCAACCTCCAAATGCTTCTTTAAGTGATATTGATGATGGAGTTATAGGTATAGGATCTTTCAGTAACGAATTCTTGGCTcaaaaaatctttaataatGCAGAATCTGTCTTGCAGTTTCGGAGAGGGTTGGAGGAAGCCAGCAAGTTTCTTCCTAAATGTACTCAACTTACCACTGGTATGGAGAGCAATATGTCTTTGgagttgaagaaaaagatCGAGAAGGAAGTGATCAAGGTGGATGAGGACTTTAGGCAGGATTCGCATGGGCTAAAGGGTAGAAAGAATCCTGATCGTGAAGATATTGATGAAGAAGAGGAGAGAAGTAACAAGCAGTCAGCAGTCTACGATGATGAGAGCGATCTATCAGATATGTTTGATCAGGTATTACTTACAGTTGAGAATGTTCCTCTGTGTGCTCAACAAGAAGGCCCGCAGAATGGCTCAATTAAAGTGATGCAGCCAATTGAACAGCCTAATTCATCTGATGGAGGGAAGTCTCGCCCtaagaagaaaggcaagaagAAGGAAACCGTGGATTTGAGGACTCTTCTGGTTCTGTGTGCACAAGCTGTCTCTAGTAATGATAACAGGACTGCTAATGAACTACTGAAGCAGATTAGGCGGCACTCTTCCCCCTTTGGTGATGCAGCGCAGAGGTTGGCACATTACTTCGCAAATGGTCTGCAGGCACGCTTGGTTGGTGCTGCTACTGGAACCCAATTGGTTTACACTGCTCTTATGTCCAAGAGGTTCTCTGCTACTGATATTTTGAAAGCTTACCATGCTATCTTTTCTGTCTGTCCTTTTAAGAAGTTTGCTCATttctttacatataaaatgattCTAGAAGCTTCTGAAGAGGCAGAAAGCCTTCATATCATTGATTTTGGTATCTCATATGGTTTTCACTGGCCAATGCTTATTAAGTTTCTGTCACAGAGAACCAGGGGACCTCCCAAGCTACGCATCACAGGTATTGAATATCCACAAACTGGCTTCCGCCCAGCAGAAAGAATTGAGGAGACTGGTCGTCGTTTAGCAAACTATTGCAAGCGATTCAATGTCCCATTTGAGTACAAAGCTATAGCATCAAAAAACTGGGAAACCATCAAAGTCGAAGAATTTAACATTGACAGCAATGATCTACTGGCTGTGAACTGTCTCATGAGGTTTAAGAACTTGCTTGATGACACAATTGAGGTGAACAATCCTAGAAATGCAGTTCTGAGTTTGATAAGGAAGATGAATCCagatatttttgttcaatctgTTGTTAATGGAGCCTACAATGCCCCTTTCTTTGTCACACGGTTCAGGGAGTcactctttcatttttctgcaaTGTATGATATGTTTGACACTCTGTTAACCCGGGAGAACGAATGGAGGTTAATGAGTGAGAAAGAGTTTCTTGGGCGGGAAGCTCTAAATGTCATAGCATGTGAAGGTTCTGAGAGGGTTGAGAGGCCAGAAACATACAAGCAGTGGCAGGTTAGGAATACAAGGATTGGTTTCAGGCAGCTCCCACTGACAAAGGAACTAGTGTCCAAATTCCAGGAAAAGTTAAAGGCATGGTACCACAgagattttgttattaatgaaGACAACAACTGGATGCTTCAGGGGTGGAAGGGCCGCATTTTGTATGCCTCCACTTGTTGGGTGCCAGCATA 2432 0.4025 MLYKGRKATATNFHRSHNLQRITAIFCGRFSQIFSCFTVYGYIVHPTDEEIYKGIYAKEFQNLENDWEFEENLVNFTIDPFFQADADPVNFAPQTWVTSDVDGFVPSWTVSPAEVDLDVPFSTMSSAADSSLEKNDFSETVQSISQVLMEENLGHKQSMFYDPFSLQVTEKSFYDALKENHTSSPSQRPLYIYENVERPDVDGSDSNASNSNNSINIPWHGKPHNPKPSSLGTPISADYSFKSNLQSNSPKPCQPPNASLSDIDDGVIGIGSFSNEFLAQKIFNNAESVLQFRRGLEEASKFLPKCTQLTTGMESNMSLELKKKIEKEVIKVDEDFRQDSHGLKGRKNPDREDIDEEEERSNKQSAVYDDESDLSDMFDQVLLTVENVPLCAQQEGPQNGSIKVMQPIEQPNSSDGGKSRPKKKGKKKETVDLRTLLVLCAQAVSSNDNRTANELLKQIRRHSSPFGDAAQRLAHYFANGLQARLVGAATGTQLVYTALMSKRFSATDILKAYHAIFSVCPFKKFAHFFTYKMILEASEEAESLHIIDFGISYGFHWPMLIKFLSQRTRGPPKLRITGIEYPQTGFRPAERIEETGRRLANYCKRFNVPFEYKAIASKNWETIKVEEFNIDSNDLLAVNCLMRFKNLLDDTIEVNNPRNAVLSLIRKMNPDIFVQSVVNGAYNAPFFVTRFRESLFHFSAMYDMFDTLLTRENEWRLMSEKEFLGREALNVIACEGSERVERPETYKQWQVRNTRIGFRQLPLTKELVSKFQEKLKAWYHRDFVINEDNNWMLQGWKGRILYASTCWVPA 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00081 810 ProSiteProfiles GRAS family profile. 424 808 IPR005202 -
Bva12g00081 810 MobiDBLite consensus disorder prediction 339 370 - -
Bva12g00081 810 MobiDBLite consensus disorder prediction 393 429 - -
Bva12g00081 810 Pfam GRAS domain family 433 807 IPR005202 -
Bva12g00081 810 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 122 809 IPR005202 -
Bva12g00081 810 MobiDBLite consensus disorder prediction 393 415 - -
Bva12g00081 810 MobiDBLite consensus disorder prediction 198 236 - -
Bva12g00081 810 PANTHER SCARECROW-LIKE PROTEIN 34 122 809 - -
Bva12g00081 810 MobiDBLite consensus disorder prediction 202 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00081 Bva-Chr12 2032703 2038277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00081 140 810 GRAS Transcription Factor Family AT1G07530 49.642 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva12g00081 GRAS 9.6e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00081 - - adu:107461599 818.15