Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00074 ATGCAAGATCCACCTCCAAACCCTAGCCCCAATCCAAATCCTTACGATGGCGATGGCAATGGCAGTGGCAATGCCAATGGTAATGGCAATGCTGCTTCCCGGAACACCCAATTCCCGTCACCACCACCACTCGCCGCCTCTTCCACTTCTCAGGCGACGGCGACAACACCTTCGGTTTCTTCGTCTTCATCTTCCTTGTTCGTCAGGGGCGGAGCGAATGGTGGAGGAGCTACTGGTTCCGGCGCCGGAGGGCCGCAGTCACAGCAGCAGCACCATGCCCATCATAGGAGGGCCCACTCGGAGGTTAGCTTCCGTTTACCCGACGACATGATGGATTTTTCGCCATCTGATCCGTTCAATGGTGGGTCATCGACAGCCAGTCTTGAAGAGATCGGATCCGAGGATGATCTCTTCTCTACCTACATTGACGTTGACAAGCTTGGAGGCCCTAATGGATCGGGTAACGGAGGGAATGGATCAGATCAGAATGGTAATGGAATTGGTACAAGCAACCAcaacgaaagagagaagagCCCAATTGTGAGGCCAAGGCATAGGCATAGTAATTCTGTGGATGGCTCCACATCTACGAGCATGTTTGGGGAAATTATGGAGGCAAAGAAAGCTATGCCTCCTGATAAGTTAGCCGAGCTCTGGACAATTGATCCTAAGCGTGCCAAGAGaatacTGGCGAATCGACAATCTGCTGCTCGTTCGAAAGAGAGAAAAGCCCGTTACATACAAGAACTTGAGCGTAAAGTTCAGACACTTCAGACAGAAGCAACAACTCTCTCTGCCCAACTTACACTGTACCAGAGGGACACAACTGGTCTTAGTACTGAAAATACAGAGCTTAAGCTCCGTCTTCAAGCCATGGAGCAACAGGCACAGCTTCGAGATGCTCTTAACGAAGCATTGAAGAAGGAGGTTGAGAGGCTTAAAATTGCTACTGGAGAGATGATGAGTCCATGCGAGTCTTTCAATCTGGGAATGCACCAGATGCCATTTAcatcatcaaatttttttccacTTCCGCAACATTCAGGTCCTTCTGGTCACCAGAACATGCAGTTGCCACCATTCAATCACTCATCATCCAGTATGCCAACTCATCAACTGCAACAAGCAAATTCTCATCCATTTTCAGAAATATTGCAAAATGATCAACTTGGTCGTTTGCAAGGGCTTGAAATTAGTGGCAAATGGTCAACGCTTGTGAAGTCTGAAGGCCCCTCACTTTCTGCAAGTGAGAGTAGCAcaacattttg 1268 0.4724 MQDPPPNPSPNPNPYDGDGNGSGNANGNGNAASRNTQFPSPPPLAASSTSQATATTPSVSSSSSSLFVRGGANGGGATGSGAGGPQSQQQHHAHHRRAHSEVSFRLPDDMMDFSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVDKLGGPNGSGNGGNGSDQNGNGIGTSNHNEREKSPIVRPRHRHSNSVDGSTSTSMFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGEMMSPCESFNLGMHQMPFTSSNFFPLPQHSGPSGHQNMQLPPFNHSSSSMPTHQLQQANSHPFSEILQNDQLGRLQGLEISGKWSTLVKSEGPSLSASESSTTF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00074 422 SUPERFAMILY Leucine zipper domain 224 275 IPR046347 GO:0003700|GO:0006355
Bva12g00074 422 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 49 419 - -
Bva12g00074 422 CDD bZIP_plant_RF2 225 274 IPR044759 GO:0003700|GO:0006355
Bva12g00074 422 MobiDBLite consensus disorder prediction 1 197 - -
Bva12g00074 422 Pfam bZIP transcription factor 224 279 IPR004827 GO:0003700|GO:0006355
Bva12g00074 422 MobiDBLite consensus disorder prediction 14 69 - -
Bva12g00074 422 PANTHER BZIP TRANSCRIPTION FACTOR 49 419 - -
Bva12g00074 422 SMART brlzneu 220 284 IPR004827 GO:0003700|GO:0006355
Bva12g00074 422 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 222 285 IPR004827 GO:0003700|GO:0006355
Bva12g00074 422 Coils Coil 288 319 - -
Bva12g00074 422 MobiDBLite consensus disorder prediction 175 189 - -
Bva12g00074 422 MobiDBLite consensus disorder prediction 347 378 - -
Bva12g00074 422 Gene3D - 223 276 - -
Bva12g00074 422 MobiDBLite consensus disorder prediction 153 174 - -
Bva12g00074 422 Coils Coil 240 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00074 Bva-Chr12 1886692 1890002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00074 94 422 bZIP Transcription Factor Family AT2G40620 53.444 1.42e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva12g00074 bZIP_1 5.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00074 - - gmx:100790732 499.975