Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva12g00070 | ATGGCTGGGAGTAATGATAATGTTGTCCTAACTAGTGATTGGGGTGCTCCAAGTCCAAGTCCAAGAACTTTTTTCTCTAGAATGCTTGGTGAAGATAATGACGGAAAAGCAACGTCAGACCCTCCCAGAAGTGCTATAACTGAGGAACTCTTTCTAGGAGCTCGAGACCCCACTGCAACTGGAAAATCCAACATAGAAGATACAGTGCAAGATGGTGATTCTGACGGTCAATTTAGTGACCCAAATTCCTTGTCTGAGCAAAAGTCAAGCTCACGTGGAGGTCTTGTTGAAAGAATGGCAGCTAGAGCTGGGTTTAATGCTCCAAGGTTGAATACTGAAAGCATTAGATCAGCTGACCTTTCACTTAATTCTGACATTCGATCTCCTTACTTGACCATACCTCCTGGTCTCAGTCCAACTACACTTTTAGATTCCCCAGTGTTCCTTTCAAATTCACTGGCACAGCCATCTCCAACAACTGGGAAGTTTCCCTTTATTTCAAATGGCAACACCCGTGGCATAGAATTATCCTCAGATGTTCCTGGAAAAAGTAAAGACAATGTCTTTGATGATATCTATGCATCATCATTGGCTTGCAAGCGCACTACAGATTTGGGATCGTCCTTTTACAGCAGTGCAGCAAGAAAAATAAATTCAACTACTCAACCTCAACAATCCCTTCCTGGTATTGAGGTCTCATTTCAGTCAGAAAATTCTTTCCATTCTCTGAATGCTGGTGCAGTCAAAGTTCAAGCAGCAGACTTTGTTGAGTCACctcctcaaaaagaaaatggaactAGTTTTGTGTCACCTGATCAAAGGGTTTTTGATACGGTTGGTGGCAGTGCTGAGCATTCTACACCACTTGAGGAACAAGCAGATGAAGAAGGAGATCAAAGAGGGAGTACGGACTCAATGACTACTGGTGTTGGTAGCGCACCATCTGAGGATGGATATAACTGGAGAAAATATGGGCAAAAACAAGTCAAGGGTAGTGAATACCCACGAAGTTACTACAAGTGTACACATCCAAGTTGTAATGTTAAGAAGAAAGTAGAACGATCTTATGAGGGCCACATAACCGAGATAATCTATAAAGGGGCTCACAACCATCCCAAACCTCCTCCAAATCGCCGGTCAGCCATAGGTTCACTGAATCCTCTTACTGGCATGCAGGTAGACAATCCTGAACACATTGAACTATCGAGTGGTGGTGATGTTGAACTGGGCTGGGCAAGTGCACAAAAGGGAAATATAACTAGAGCTGCTGATTGGAAGCACGACAACCTTGAGGTGACATCAGCATCTGCAGGCCCTGAATACTGCAACCAGTCTACTAATTTGCAGACTCAGAATGGTACTCACTTGGAATCAGGAGATGTAGTGGATGCATCTTCAACTTTTTccaatgaagaagatgaagatgatcgAGCTACTCATGGCAGTGTATCATTAGGTTATGATGGGGAAGGAGACGAATCAGAGTCTAAAAGAAGGAAACTAGAATCATACTCAACAGAATTGAGTGGAGCCACTAGAGCTATTCGGGAGCCTAGAGTTGTTGTTCAAACTACCAGCGAAGTAGATATCTTAGATGATGGATACCGGTGGCGGAAGTATGGGCAAAAAGTTGTTAAAGGAAATCCTAATCCAAGGAGTTACTACAAGTGCACTCACGCAGGTTGCACTGTAAGAAAGCATGTGGAGAGGGCATCACATGACCTTAAGTCCGTGATTACTACATATGAGGGCAAGCACAATCATGATGTTCCTGCTGCACGCACCAGCAGCCATGTCAATGCAGCTGCTTCTGGCACGGTTTCTGCTCAAGCTCCCACTGTTATTCAATCCCATGTTCATAAACCTGAACCATCACAAGTTCACAACGCCATGGGAAGGCTTGAGAGGCCTGCACTGGGTTCATTCAATCTACCTGGGAGGCAGCAACTTGGAGCTTCTCTTGGTCATGGCTTTTCCTTTGGGATGAATCAACCTGGCATGGCCAATCTAGCCATGGCAAGATTAGGCCCTGCTCAAGGGAAGTTTCCTGTCATTcctgttcatccatttttctcCCAACAACGCCCACCAAACGAAATGGGTTTCATGTTTCCAAAAGGAGAACCAAACGTGGAACCAATTCCAGAACGTGGGCTTAACATGCCAAGTGGTTCATCGGTATATCAAGGAATGATGAATCGGATGCCTCTTGGACCTcagatgta | 2225 | 0.4324 | MAGSNDNVVLTSDWGAPSPSPRTFFSRMLGEDNDGKATSDPPRSAITEELFLGARDPTATGKSNIEDTVQDGDSDGQFSDPNSLSEQKSSSRGGLVERMAARAGFNAPRLNTESIRSADLSLNSDIRSPYLTIPPGLSPTTLLDSPVFLSNSLAQPSPTTGKFPFISNGNTRGIELSSDVPGKSKDNVFDDIYASSLACKRTTDLGSSFYSSAARKINSTTQPQQSLPGIEVSFQSENSFHSLNAGAVKVQAADFVESPPQKENGTSFVSPDQRVFDTVGGSAEHSTPLEEQADEEGDQRGSTDSMTTGVGSAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPSCNVKKKVERSYEGHITEIIYKGAHNHPKPPPNRRSAIGSLNPLTGMQVDNPEHIELSSGGDVELGWASAQKGNITRAADWKHDNLEVTSASAGPEYCNQSTNLQTQNGTHLESGDVVDASSTFSNEEDEDDRATHGSVSLGYDGEGDESESKRRKLESYSTELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARTSSHVNAAASGTVSAQAPTVIQSHVHKPEPSQVHNAMGRLERPALGSFNLPGRQQLGASLGHGFSFGMNQPGMANLAMARLGPAQGKFPVIPVHPFFSQQRPPNEMGFMFPKGEPNVEPIPERGLNMPSGSSVYQGMMNRMPLGPQM | 741 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva12g00070 | 741 | Pfam | WRKY DNA -binding domain | 532 | 588 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g00070 | 741 | Pfam | WRKY DNA -binding domain | 316 | 372 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g00070 | 741 | Gene3D | WRKY domain | 518 | 584 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g00070 | 741 | ProSiteProfiles | WRKY domain profile. | 310 | 374 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g00070 | 741 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 76 | 704 | IPR044810 | GO:0003700 | |
Bva12g00070 | 741 | SUPERFAMILY | WRKY DNA-binding domain | 311 | 374 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g00070 | 741 | SUPERFAMILY | WRKY DNA-binding domain | 523 | 591 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g00070 | 741 | PANTHER | WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 | 76 | 704 | - | - | |
Bva12g00070 | 741 | MobiDBLite | consensus disorder prediction | 437 | 504 | - | - | |
Bva12g00070 | 741 | MobiDBLite | consensus disorder prediction | 490 | 504 | - | - | |
Bva12g00070 | 741 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Bva12g00070 | 741 | MobiDBLite | consensus disorder prediction | 437 | 466 | - | - | |
Bva12g00070 | 741 | MobiDBLite | consensus disorder prediction | 1 | 100 | - | - | |
Bva12g00070 | 741 | ProSiteProfiles | WRKY domain profile. | 526 | 591 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g00070 | 741 | MobiDBLite | consensus disorder prediction | 258 | 320 | - | - | |
Bva12g00070 | 741 | Gene3D | WRKY domain | 301 | 375 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g00070 | 741 | MobiDBLite | consensus disorder prediction | 61 | 92 | - | - | |
Bva12g00070 | 741 | SMART | WRKY_cls | 531 | 590 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g00070 | 741 | SMART | WRKY_cls | 315 | 373 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva12g00070 | Bva-Chr12 | 1803314 | 1808815 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva12g00070 | 1 | 736 | WRKY Transcription Factor Family | AT5G56270 | 49.804 | 0.0 | 555 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Bva12g00070 | WRKY | 1.7e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva12g00070 | K18835 | - | gmx:100796545 | 1095.88 |