Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00070 ATGGCTGGGAGTAATGATAATGTTGTCCTAACTAGTGATTGGGGTGCTCCAAGTCCAAGTCCAAGAACTTTTTTCTCTAGAATGCTTGGTGAAGATAATGACGGAAAAGCAACGTCAGACCCTCCCAGAAGTGCTATAACTGAGGAACTCTTTCTAGGAGCTCGAGACCCCACTGCAACTGGAAAATCCAACATAGAAGATACAGTGCAAGATGGTGATTCTGACGGTCAATTTAGTGACCCAAATTCCTTGTCTGAGCAAAAGTCAAGCTCACGTGGAGGTCTTGTTGAAAGAATGGCAGCTAGAGCTGGGTTTAATGCTCCAAGGTTGAATACTGAAAGCATTAGATCAGCTGACCTTTCACTTAATTCTGACATTCGATCTCCTTACTTGACCATACCTCCTGGTCTCAGTCCAACTACACTTTTAGATTCCCCAGTGTTCCTTTCAAATTCACTGGCACAGCCATCTCCAACAACTGGGAAGTTTCCCTTTATTTCAAATGGCAACACCCGTGGCATAGAATTATCCTCAGATGTTCCTGGAAAAAGTAAAGACAATGTCTTTGATGATATCTATGCATCATCATTGGCTTGCAAGCGCACTACAGATTTGGGATCGTCCTTTTACAGCAGTGCAGCAAGAAAAATAAATTCAACTACTCAACCTCAACAATCCCTTCCTGGTATTGAGGTCTCATTTCAGTCAGAAAATTCTTTCCATTCTCTGAATGCTGGTGCAGTCAAAGTTCAAGCAGCAGACTTTGTTGAGTCACctcctcaaaaagaaaatggaactAGTTTTGTGTCACCTGATCAAAGGGTTTTTGATACGGTTGGTGGCAGTGCTGAGCATTCTACACCACTTGAGGAACAAGCAGATGAAGAAGGAGATCAAAGAGGGAGTACGGACTCAATGACTACTGGTGTTGGTAGCGCACCATCTGAGGATGGATATAACTGGAGAAAATATGGGCAAAAACAAGTCAAGGGTAGTGAATACCCACGAAGTTACTACAAGTGTACACATCCAAGTTGTAATGTTAAGAAGAAAGTAGAACGATCTTATGAGGGCCACATAACCGAGATAATCTATAAAGGGGCTCACAACCATCCCAAACCTCCTCCAAATCGCCGGTCAGCCATAGGTTCACTGAATCCTCTTACTGGCATGCAGGTAGACAATCCTGAACACATTGAACTATCGAGTGGTGGTGATGTTGAACTGGGCTGGGCAAGTGCACAAAAGGGAAATATAACTAGAGCTGCTGATTGGAAGCACGACAACCTTGAGGTGACATCAGCATCTGCAGGCCCTGAATACTGCAACCAGTCTACTAATTTGCAGACTCAGAATGGTACTCACTTGGAATCAGGAGATGTAGTGGATGCATCTTCAACTTTTTccaatgaagaagatgaagatgatcgAGCTACTCATGGCAGTGTATCATTAGGTTATGATGGGGAAGGAGACGAATCAGAGTCTAAAAGAAGGAAACTAGAATCATACTCAACAGAATTGAGTGGAGCCACTAGAGCTATTCGGGAGCCTAGAGTTGTTGTTCAAACTACCAGCGAAGTAGATATCTTAGATGATGGATACCGGTGGCGGAAGTATGGGCAAAAAGTTGTTAAAGGAAATCCTAATCCAAGGAGTTACTACAAGTGCACTCACGCAGGTTGCACTGTAAGAAAGCATGTGGAGAGGGCATCACATGACCTTAAGTCCGTGATTACTACATATGAGGGCAAGCACAATCATGATGTTCCTGCTGCACGCACCAGCAGCCATGTCAATGCAGCTGCTTCTGGCACGGTTTCTGCTCAAGCTCCCACTGTTATTCAATCCCATGTTCATAAACCTGAACCATCACAAGTTCACAACGCCATGGGAAGGCTTGAGAGGCCTGCACTGGGTTCATTCAATCTACCTGGGAGGCAGCAACTTGGAGCTTCTCTTGGTCATGGCTTTTCCTTTGGGATGAATCAACCTGGCATGGCCAATCTAGCCATGGCAAGATTAGGCCCTGCTCAAGGGAAGTTTCCTGTCATTcctgttcatccatttttctcCCAACAACGCCCACCAAACGAAATGGGTTTCATGTTTCCAAAAGGAGAACCAAACGTGGAACCAATTCCAGAACGTGGGCTTAACATGCCAAGTGGTTCATCGGTATATCAAGGAATGATGAATCGGATGCCTCTTGGACCTcagatgta 2225 0.4324 MAGSNDNVVLTSDWGAPSPSPRTFFSRMLGEDNDGKATSDPPRSAITEELFLGARDPTATGKSNIEDTVQDGDSDGQFSDPNSLSEQKSSSRGGLVERMAARAGFNAPRLNTESIRSADLSLNSDIRSPYLTIPPGLSPTTLLDSPVFLSNSLAQPSPTTGKFPFISNGNTRGIELSSDVPGKSKDNVFDDIYASSLACKRTTDLGSSFYSSAARKINSTTQPQQSLPGIEVSFQSENSFHSLNAGAVKVQAADFVESPPQKENGTSFVSPDQRVFDTVGGSAEHSTPLEEQADEEGDQRGSTDSMTTGVGSAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPSCNVKKKVERSYEGHITEIIYKGAHNHPKPPPNRRSAIGSLNPLTGMQVDNPEHIELSSGGDVELGWASAQKGNITRAADWKHDNLEVTSASAGPEYCNQSTNLQTQNGTHLESGDVVDASSTFSNEEDEDDRATHGSVSLGYDGEGDESESKRRKLESYSTELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARTSSHVNAAASGTVSAQAPTVIQSHVHKPEPSQVHNAMGRLERPALGSFNLPGRQQLGASLGHGFSFGMNQPGMANLAMARLGPAQGKFPVIPVHPFFSQQRPPNEMGFMFPKGEPNVEPIPERGLNMPSGSSVYQGMMNRMPLGPQM 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00070 741 Pfam WRKY DNA -binding domain 532 588 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00070 741 Pfam WRKY DNA -binding domain 316 372 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00070 741 Gene3D WRKY domain 518 584 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g00070 741 ProSiteProfiles WRKY domain profile. 310 374 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00070 741 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 76 704 IPR044810 GO:0003700
Bva12g00070 741 SUPERFAMILY WRKY DNA-binding domain 311 374 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g00070 741 SUPERFAMILY WRKY DNA-binding domain 523 591 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g00070 741 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 76 704 - -
Bva12g00070 741 MobiDBLite consensus disorder prediction 437 504 - -
Bva12g00070 741 MobiDBLite consensus disorder prediction 490 504 - -
Bva12g00070 741 MobiDBLite consensus disorder prediction 1 19 - -
Bva12g00070 741 MobiDBLite consensus disorder prediction 437 466 - -
Bva12g00070 741 MobiDBLite consensus disorder prediction 1 100 - -
Bva12g00070 741 ProSiteProfiles WRKY domain profile. 526 591 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00070 741 MobiDBLite consensus disorder prediction 258 320 - -
Bva12g00070 741 Gene3D WRKY domain 301 375 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g00070 741 MobiDBLite consensus disorder prediction 61 92 - -
Bva12g00070 741 SMART WRKY_cls 531 590 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00070 741 SMART WRKY_cls 315 373 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00070 Bva-Chr12 1803314 1808815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00070 1 736 WRKY Transcription Factor Family AT5G56270 49.804 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva12g00070 WRKY 1.7e-24 CL0274