Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00024 ATGCTCCTGCAAGCTACGGCAGGtttttcatccaaaaattTGATTGGATCTGGTAGTTTTGGTTCTGTATATAAAGGGACTCTGGATCAGGAGGAAAGACTTGTAGCTGTGAAGGTCCTCTATCTACAGAAGAAGGGAGCTTCAAAGAGCTTCTTGGCAGAATGCAATGCCTTGAAAGGAATTAGGCATCGAAACCTTGTCAAGTTATTGACATGCTGCTCTAGCACTGATTACAATGGCAATGATTTCAAAGCtcttgtttttgaatttctgaCAAATGGAAGCTTAGAGAAATGGCTACATCCAGAGGGAAGTGAAAATCAACGATTACACTTTCTTCAGAGACTAAATATTGCAATAGATGTGGCTTCTGCTTTATATTATCTTCACAATGAATGTGAACTTCCATTGTTCATTGTGATTTA 425 0.3671 MLLQATAGFSSKNLIGSGSFGSVYKGTLDQEERLVAVKVLYLQKKGASKSFLAECNALKGIRHRNLVKLLTCCSSTDYNGNDFKALVFEFLTNGSLEKWLHPEGSENQRLHFLQRLNIAIDVASALYYLHNECELPLFIVI 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00024 141 PANTHER PUTATIVE-RELATED 2 137 - -
Bva12g00024 141 PANTHER OS04G0122200 PROTEIN 2 137 - -
Bva12g00024 141 SUPERFAMILY Protein kinase-like (PK-like) 4 133 IPR011009 -
Bva12g00024 141 ProSiteProfiles Protein kinase domain profile. 9 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00024 141 Pfam Protein tyrosine and serine/threonine kinase 12 131 IPR001245 GO:0004672|GO:0006468
Bva12g00024 141 Gene3D Transferase(Phosphotransferase) domain 1 91 139 - -
Bva12g00024 141 SMART serkin_6 9 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00024 141 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva12g00024 141 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00024 Bva-Chr12 759701 760126 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00024 2 137 Receptor kinase-like Gene Family AT3G47090 60.284 4.37e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva12g00024 PK_Tyr_Ser-Thr 5.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00024 - - zju:107413838 204.142