Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00023 ATGGAAGCCAAGATTAAAGCTCTTCAACAGAACCACACTTGGGATTTCAGGCCTTACCCTAATAATAAAATCGTAGTGGGAAATAAATGCGTTTATAAGGTTAAATATAGGGTTGAATTCCTCATCTGCTTGTTGTTGACTATTCTGGGGTATATACCAGGGATTATTTATGCTCTATATGCTATTATCTTTGTGGATCATGACCAGTACTTTGATGAATATAGGCGTCCTTTGTATGCATA 242 0.3636 MEAKIKALQQNHTWDFRPYPNNKIVVGNKCVYKVKYRVEFLICLLLTILGYIPGIIYALYAIIFVDHDQYFDEYRRPLYA 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00023 80 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 30 79 IPR000612 GO:0016021
Bva12g00023 80 Pfam Proteolipid membrane potential modulator 37 62 IPR000612 GO:0016021
Bva12g00023 80 PANTHER BNAA03G50460D PROTEIN 30 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00023 Bva-Chr12 684107 685035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00023 38 79 RCI2 Gene Family AT4G28088 76.190 2.54e-20 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00023 - - gmx:100306426 88.1965