Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00019 ATGCTCCTGCAAGCTACGGCAGGtttttcatccaaaaattTGATTGGATCTGGTAGTTTTGGTTCTGTATATAAAGGGACTCTGGATCAGGAGGAAAGACTTGTAGCTGTGAAGGTCCTAAATCTACAGAAGGGAGCTTCAAAGAGCTTCTTGGCAGAGTGCAATGCCTTGAAAGGAATTAGGCATCAAAACCTTGTCAAGTTATTCACACGCTGCTCTAGCACTGATTACAATGGCAATAATTTCAAAGCtcttgtttttgaatttctgaCAAACGGAAGCTTAGAGAAATGGCTACATCCAGAGGAAAGTGAAAATCATTA 323 0.3777 MLLQATAGFSSKNLIGSGSFGSVYKGTLDQEERLVAVKVLNLQKGASKSFLAECNALKGIRHQNLVKLFTRCSSTDYNGNNFKALVFEFLTNGSLEKWLHPEESENH 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00019 107 PANTHER PUTATIVE-RELATED 2 102 - -
Bva12g00019 107 ProSiteProfiles Protein kinase domain profile. 9 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00019 107 PANTHER OS04G0122200 PROTEIN 2 102 - -
Bva12g00019 107 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva12g00019 107 SUPERFAMILY Protein kinase-like (PK-like) 4 101 IPR011009 -
Bva12g00019 107 Pfam Protein tyrosine and serine/threonine kinase 12 103 IPR001245 GO:0004672|GO:0006468
Bva12g00019 107 Gene3D Transferase(Phosphotransferase) domain 1 2 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00019 Bva-Chr12 562251 562574 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00019 2 105 Receptor kinase-like Gene Family AT3G47090 63.810 1.80e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva12g00019 PK_Tyr_Ser-Thr 1.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00019 - - qsu:112023736 163.696