Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02253 ATGGATTCGCCTCTAAGGAACACGCTCAAGACTCTTTGTTGTTGTAATGGTTGGTCTTACGCCATCTTTTGGCGTTTTGATCCACGAAATTCCTTGTTGTTGACGGCGGCAGATGAAGATGCCTACTATAATAAGGAACAACAATTGGAAGAGGACATGCGCGGTATGCTTGCACAGGTCCACTTGCTGGGCCAAGGAATTGTTGGTCAAGCGGCATTCACTGGAAAGCACAGATGGATGGTCTCGAATGCCAAATCCCAACGATGGAATTTCACACGAGATCAAGATCAAGATCTAAGCCAGGACGATTCTCAATTGCGTCAACTCTTCTTCTCTGAAATAAAGACAATTGTGGTGGTGTCTGTCAAACCATGGGGAGTGGTTCAATTCGGATCCAACCACAAGATCTCGGAAAGATTGGAGTTTTTAGAACAAATACAAAGAGTGTTCAGTGGGATAGAAGATGTCGACGCGCTTGATCCATCAGAAAATGCAGCTTCACCGTTGGATTGTGAAAACTATGATCTAAATGAATTGTTGTCCTCCTTCACTTGCTCAGAAAATTCTTGTGAATGGAATCTCAACTCTCTTTATGGTGATGGTTCCGGAGAGCTAATGGCAAATGTTTATTCTTCTAAGAATCCTGAAGAAGGGGATGCTCCCATACATGGagatatttcttgttttagtGACCAATTGACAGCGGTCTCAGCATTATCGTATAGAACTGGTACCGATGTGTTTTTGAAATCTAACTCTTCCATGGACAGCTTAATTGCCACAGGCCCCTGTTTTGGCACATGTAGTGGTGAAGTTTCTTCTTTGGAGCCGCAACTGGTACCTCAAACAAGGACTCAAGATGTCGCAGACATGTGTTCGTTAGAAGCAAACACATTCGTTTCTAGCAAACTAACCGTTGAGAATTTTCATGAGGATTCAGCACCGACCTCATTGTATAGCAAGAATGGATTGCTTGGCCAAAGAGGAACATTTCAACATAAATTAGGAAATTCATTGGACAATCAACATTCTCCTCAGTCTACTATTGTGACAGAAGATAATTTTGCGCATGGTATCTCTAACAACTTAAAGCCAGTTGGTACGTCGGAGAACCTTTCTAAGTTCCGCTCCATGGATGATCTTTGTCGGTGGTTTGCTCCTTCTCCAGAGGATAGCATATGCGGAACAGTAACTTCATTTGATTCTCAAACAATGGAATTTTATCCCACATATTCTAGTCTTGTTGGAATTGATATCTTGAGTGGCAATCCAGTAGAAGGTCCTGCTGTGCATAATTCCATTTCTGCTACAGTGAACTCGGTCTTGGAGGGACAAGAAACATTTGCAACTATGTATATTTCTGACAATGGCCTATCGGatatcatgaaacttgatctCAACTGCGACCAGGCTGCTGAGTGGCCGGGAAATACTCTTACACCAGTGGCGGATGCTGCTACTGGTTCTGGATTATCTGAATGCATATCTGAGTTGAAGAATATTGGTACACTGACTCGCACCCAAAAGGGCTTATTCTCTGAGTTGGGTATTGAAGATCTTTTGAATGGTACcgaaaattctaattttgagGATAATAAAAGTCAGAAGACAGATTGTTCATCTTCAGGTCTTGCTTGCTCTTGGGCTAGGGCAAGGGCAAACTTGATGCAGCCTGTGTCTAATATTGGGAAGACAAACCATCTTGTACACAAGCAAGAGATCTTCCCAAAATCACAGGTAGGCTTGTGGATTGATGATAACCATAGCGTCAACAATGGGAAGGCTGTTCTTCCATCACGGCCTCAAAAGCCAGAGGAACCTACAAGGATGACGAGGAAGAGCCTTAAGCGACCAAAAGATCGTCAGCAAATCCAAGACCGCATTAAAGAGTTGAGAGGGATCATTCCCCATGGTGGAAAGTGTAGCATTGATTCTTTGTTGGATCGTACCATCAAATACATGCTTTTCTTACAAAGCATCACTAAATATGCGGATAAGctacaagaaaacaataatgaaCCTAAGCTCATTGAGCAGGGAAACGGAGTGGTtctaaaagacaaaattgtaGGAGATAGCAAAACTGATGATGGTTTTACTTGGGCATTTGAAGTTGGGGGTCAGACATTGGTTTGCCCAATTGTAGTTGAGGACATGAGTCCAGCTGGCCAAATGCTTATAGAGATGCGTTGTGAGGAGCAGGGTTTGTTCCTGGAGATAGCGGACATAATTCGGGGATTTGGGCTGAATATCTTGAAAGGAAAGATGGAAATTAGAGAGAGCAGAATTTGGGCCCGCTTTATTGTTGAAGCGAAGAGACACGTAACAAGGTTAGATGTATTTTGGTCTCTTATCCAACTTGTACAAGTACAGCAAACAACCATTTGTGGAATGGATTCAGATTCTGCTGGGATTCCTTCACTAGAGATGCCAGTTGCCATGTCCATGGCCGAGACAGTTGGGCGATA 2468 0.419 MDSPLRNTLKTLCCCNGWSYAIFWRFDPRNSLLLTAADEDAYYNKEQQLEEDMRGMLAQVHLLGQGIVGQAAFTGKHRWMVSNAKSQRWNFTRDQDQDLSQDDSQLRQLFFSEIKTIVVVSVKPWGVVQFGSNHKISERLEFLEQIQRVFSGIEDVDALDPSENAASPLDCENYDLNELLSSFTCSENSCEWNLNSLYGDGSGELMANVYSSKNPEEGDAPIHGDISCFSDQLTAVSALSYRTGTDVFLKSNSSMDSLIATGPCFGTCSGEVSSLEPQLVPQTRTQDVADMCSLEANTFVSSKLTVENFHEDSAPTSLYSKNGLLGQRGTFQHKLGNSLDNQHSPQSTIVTEDNFAHGISNNLKPVGTSENLSKFRSMDDLCRWFAPSPEDSICGTVTSFDSQTMEFYPTYSSLVGIDILSGNPVEGPAVHNSISATVNSVLEGQETFATMYISDNGLSDIMKLDLNCDQAAEWPGNTLTPVADAATGSGLSECISELKNIGTLTRTQKGLFSELGIEDLLNGTENSNFEDNKSQKTDCSSSGLACSWARARANLMQPVSNIGKTNHLVHKQEIFPKSQVGLWIDDNHSVNNGKAVLPSRPQKPEEPTRMTRKSLKRPKDRQQIQDRIKELRGIIPHGGKCSIDSLLDRTIKYMLFLQSITKYADKLQENNNEPKLIEQGNGVVLKDKIVGDSKTDDGFTWAFEVGGQTLVCPIVVEDMSPAGQMLIEMRCEEQGLFLEIADIIRGFGLNILKGKMEIRESRIWARFIVEAKRHVTRLDVFWSLIQLVQVQQTTICGMDSDSAGIPSLEMPVAMSMAETVGR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02253 822 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 608 657 IPR011598 GO:0046983
Bva11g02253 822 MobiDBLite consensus disorder prediction 591 623 - -
Bva11g02253 822 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 1 795 - -
Bva11g02253 822 MobiDBLite consensus disorder prediction 605 623 - -
Bva11g02253 822 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 795 IPR043561 GO:0003700|GO:0006355
Bva11g02253 822 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 621 663 IPR036638 GO:0046983
Bva11g02253 822 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 56 150 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02253 Bva-Chr11 18153726 18157930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02253 570 802 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 45.528 5.57e-58 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02253 - - gmx:100798158 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02253 11 18153726 18157930 Bva11g02253 11 18153726 18157930 ECH