Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02238 ATGGGTGCTCCACAAACGGCAGAGGCTCCTCATCTGTATCCGCAAGAACTTCAGCTTAAACTTTACCAGGCCTTCATATTCTCAATCCCCATACTCTTTTCCATTATTCTCTTCCTCTTGTTTTACTTGTTCTACCTCAAGAGAAGAGCTTCCTCTCAGTCTCTCTCGTCCCCCGCCACCGTCAATAATAATCATCCACCACCGCCACCAACTGCATATCTCTCCTCACCATGTCGTTTGGATGTGACCCTGCAGTTTCTCGACaaactttcaaaaattttatttgatgagGAATTGAGAGCAAGAGATTCCCAATGCTGCGTTTGCCTTGGAGAATTTGAGCTCAAACAAGAGTTGCTGCAGATTCCTCACTGCAGACATCTCTTTCATATTGATTGCATTCGTCTTTGGCTAGAATCAAACTCCACTTGCCCACTTTGTAGATATTCCATCTTCCCCACAACAAAATTGCTAAACCCGGCACTGCCCCTTATACCGGACCCAGTCCACCGTGCCACTCCATCGCAACAGGTACCAGAAAATGAGGTCGCTGCTTCCTCAACAGCTGCCCATTTTTCCAGAGAATA 587 0.4514 MGAPQTAEAPHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSQSLSSPATVNNNHPPPPPTAYLSSPCRLDVTLQFLDKLSKILFDEELRARDSQCCVCLGEFELKQELLQIPHCRHLFHIDCIRLWLESNSTCPLCRYSIFPTTKLLNPALPLIPDPVHRATPSQQVPENEVAASSTAAHFSRE 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02238 195 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 7 163 - -
Bva11g02238 195 MobiDBLite consensus disorder prediction 174 195 - -
Bva11g02238 195 SUPERFAMILY RING/U-box 84 157 - -
Bva11g02238 195 SMART ring_2 106 147 IPR001841 -
Bva11g02238 195 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHA4A-RELATED 7 163 - -
Bva11g02238 195 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Bva11g02238 195 MobiDBLite consensus disorder prediction 169 195 - -
Bva11g02238 195 Pfam Ring finger domain 105 148 IPR001841 -
Bva11g02238 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 153 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02238 Bva-Chr11 18089275 18090615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02238 9 153 C3H Transcription Factor Family AT4G10150 38.621 2.56e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02238 K19039 - aprc:113858113 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02238 11 18089275 18090615 Bva11g02238 11 18089275 18090615 ECH