Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02235 ATGGATGCTGAAATCCAAGCAAAAATCGAGGAAACGGTTCGAAGAATTCTTGAAGAATCTGACTTGAACGAGATGACGGAGTCCAAGATTAGGAAGCAGGCCGCCAAAGAGCTCGACCTCGACCTGTCGGAGCCGCACTACAAAGCCTTCGTCAAGCGGATTGTGAAGTCTTTCCTCGaggaaaaacaagaagaagagaagcagCAACAAGAGGAAAGTACCAAGCAGTACGATGATGGTGGCGATCTCATAATTTGCAAGTTGTCAGAGAAGAGAAGGGTGACCATTCAGGAATTCAGAGGGAAAACTTTGGTCTCTATTCGCGAATACTATAAAAGGGATGGCAAAGAACTTCCTAGTTCCAAAGGAATAAGTTTGACAGAGGAGCAAtggtcaactttaaagaaGAACATACCAGCCATTGAAAAAGCTATTAAGAAAATGGAGTGCCGCAGCACATA 461 0.4078 MDAEIQAKIEETVRRILEESDLNEMTESKIRKQAAKELDLDLSEPHYKAFVKRIVKSFLEEKQEEEKQQQEESTKQYDDGGDLIICKLSEKRRVTIQEFRGKTLVSIREYYKRDGKELPSSKGISLTEEQWSTLKKNIPAIEKAIKKMECRST 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02235 153 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 150 IPR045125 GO:0003713|GO:0060261
Bva11g02235 153 Pfam Transcriptional Coactivator p15 (PC4) 86 137 IPR003173 GO:0003677|GO:0006355
Bva11g02235 153 Gene3D - 3 62 - -
Bva11g02235 153 Gene3D Transcriptional Coactivator Pc4; Chain A 74 151 IPR009044 GO:0003677|GO:0006355
Bva11g02235 153 Coils Coil 56 76 - -
Bva11g02235 153 SUPERFAMILY DEK C-terminal domain 8 60 - -
Bva11g02235 153 SUPERFAMILY ssDNA-binding transcriptional regulator domain 85 148 IPR009044 GO:0003677|GO:0006355
Bva11g02235 153 PIRSF RNA_polymII_KELP 1 152 IPR017415 -
Bva11g02235 153 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 3 150 - -
Bva11g02235 153 Pfam DEK C terminal domain 7 59 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02235 Bva-Chr11 18073056 18075031 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Bva11g02235 DEK_C 1.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02235 K25815 - gmx:100305633 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02235 11 18073056 18075031 Bva11g02235 11 18073056 18075031 ECH