Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva11g02211 | ATGGAGCAAATGCAGGACGGTGCTGATATAGGTTCCTCTCTGTCAAAGCTCATCTTATCAGGTGGGGATAACACTTTGGATTCAATTTTCTCACATTGGCCGAGCCCGGCAACAAATGGTACTACCAATTCTGTGCTTGAGCCATTGGGCTCTTCCGTCTATCTCCACCAGAGAGATCTTCTACAAAAGTTCTATGAGCAAAGCAGGGCAAAATGCTCTTACGTTGGCACTTCATTCACAAATCAGCCTCCAAATTCTCTGTGCACtacttttacttctacttcTACTTCTTTTATGACACCATGCAAGAAAAAGCTATACAGGGGAGTGAGGCAGAGGCACTGGGGCAAATGGGTCGCAGAGATTAGACTTCCGCAGAACAGAATGAGAATCTGGTTGGGTACGTATGAGACTGCTGAAGCTGCTGCTTTTGCTTATGATCGTGCTGCTTATAAGCTTCGAGGTGAATATGCGCGTCTCAATTTCCCAAATCTCAAGGACCCAAGCAAGTTAGGATTTGGAGATTGCACAAGGTTGAATGCTTTGAAGAGCTCTGTTGATGCTAAAATTCAGGCTATATGTCAAAAGGTGAAAAGGGAGAAAGCCAAAAAGAATGCGGCAAAGAAGCTCACTTCTGGCACTCACAAGTCTGAAACTAATGGTGGTGAGAGAGAGAAGtcgcaaaagcaaaagaatattGATTCCTCCTCTTGCGCATCATCTCTCTCGCCCTTGTCACCTCTAATTCTCGGTGATTATTGGACAAATGAGTTGCTTTCACCAACTATTTCAGAAGATGGACTCTGGAAGGGGGACAACTCACCGTCCTCTGTTTCAACTGAGTTTCATACGACGGCAACAGAGGAATCAGAATACGAAGATTGTTCCTTGGCTAGGATGCCATCCTTCGATCCCGAGTTAATTTGGGAAGTTCTAACCAATTA | 944 | 0.4333 | MEQMQDGADIGSSLSKLILSGGDNTLDSIFSHWPSPATNGTTNSVLEPLGSSVYLHQRDLLQKFYEQSRAKCSYVGTSFTNQPPNSLCTTFTSTSTSFMTPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRIWLGTYETAEAAAFAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDCTRLNALKSSVDAKIQAICQKVKREKAKKNAAKKLTSGTHKSETNGGEREKSQKQKNIDSSSCASSLSPLSPLILGDYWTNELLSPTISEDGLWKGDNSPSSVSTEFHTTATEESEYEDCSLARMPSFDPELIWEVLTN | 314 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva11g02211 | 314 | CDD | AP2 | 105 | 165 | IPR001471 | GO:0003700|GO:0006355 | |
Bva11g02211 | 314 | Pfam | AP2 domain | 107 | 156 | IPR001471 | GO:0003700|GO:0006355 | |
Bva11g02211 | 314 | SUPERFAMILY | DNA-binding domain | 106 | 163 | IPR016177 | GO:0003677 | |
Bva11g02211 | 314 | ProSiteProfiles | AP2/ERF domain profile. | 106 | 163 | IPR001471 | GO:0003700|GO:0006355 | |
Bva11g02211 | 314 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 6 | 314 | - | - | |
Bva11g02211 | 314 | Gene3D | AP2/ERF domain | 106 | 164 | IPR036955 | GO:0003700|GO:0006355 | |
Bva11g02211 | 314 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 6 | 314 | - | - | |
Bva11g02211 | 314 | MobiDBLite | consensus disorder prediction | 204 | 241 | - | - | |
Bva11g02211 | 314 | PRINTS | Ethylene responsive element binding protein signature | 129 | 145 | IPR001471 | GO:0003700|GO:0006355 | |
Bva11g02211 | 314 | PRINTS | Ethylene responsive element binding protein signature | 107 | 118 | IPR001471 | GO:0003700|GO:0006355 | |
Bva11g02211 | 314 | MobiDBLite | consensus disorder prediction | 265 | 285 | - | - | |
Bva11g02211 | 314 | MobiDBLite | consensus disorder prediction | 265 | 290 | - | - | |
Bva11g02211 | 314 | SMART | rav1_2 | 106 | 169 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva11g02211 | Bva-Chr11 | 17950841 | 17952407 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva11g02211 | 8 | 314 | AP2-EREBP Transcription Factor Family | AT1G64380 | 47.143 | 2.76e-68 | 214 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Bva11g02211 | AP2 | 6.2e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva11g02211 | - | - | qlo:115975305 | 362.844 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva11g02211 | 11 | 17950841 | 17952407 | Bva11g02211 | 11 | 17950841 | 17952407 | ECH |