Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02211 ATGGAGCAAATGCAGGACGGTGCTGATATAGGTTCCTCTCTGTCAAAGCTCATCTTATCAGGTGGGGATAACACTTTGGATTCAATTTTCTCACATTGGCCGAGCCCGGCAACAAATGGTACTACCAATTCTGTGCTTGAGCCATTGGGCTCTTCCGTCTATCTCCACCAGAGAGATCTTCTACAAAAGTTCTATGAGCAAAGCAGGGCAAAATGCTCTTACGTTGGCACTTCATTCACAAATCAGCCTCCAAATTCTCTGTGCACtacttttacttctacttcTACTTCTTTTATGACACCATGCAAGAAAAAGCTATACAGGGGAGTGAGGCAGAGGCACTGGGGCAAATGGGTCGCAGAGATTAGACTTCCGCAGAACAGAATGAGAATCTGGTTGGGTACGTATGAGACTGCTGAAGCTGCTGCTTTTGCTTATGATCGTGCTGCTTATAAGCTTCGAGGTGAATATGCGCGTCTCAATTTCCCAAATCTCAAGGACCCAAGCAAGTTAGGATTTGGAGATTGCACAAGGTTGAATGCTTTGAAGAGCTCTGTTGATGCTAAAATTCAGGCTATATGTCAAAAGGTGAAAAGGGAGAAAGCCAAAAAGAATGCGGCAAAGAAGCTCACTTCTGGCACTCACAAGTCTGAAACTAATGGTGGTGAGAGAGAGAAGtcgcaaaagcaaaagaatattGATTCCTCCTCTTGCGCATCATCTCTCTCGCCCTTGTCACCTCTAATTCTCGGTGATTATTGGACAAATGAGTTGCTTTCACCAACTATTTCAGAAGATGGACTCTGGAAGGGGGACAACTCACCGTCCTCTGTTTCAACTGAGTTTCATACGACGGCAACAGAGGAATCAGAATACGAAGATTGTTCCTTGGCTAGGATGCCATCCTTCGATCCCGAGTTAATTTGGGAAGTTCTAACCAATTA 944 0.4333 MEQMQDGADIGSSLSKLILSGGDNTLDSIFSHWPSPATNGTTNSVLEPLGSSVYLHQRDLLQKFYEQSRAKCSYVGTSFTNQPPNSLCTTFTSTSTSFMTPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRIWLGTYETAEAAAFAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDCTRLNALKSSVDAKIQAICQKVKREKAKKNAAKKLTSGTHKSETNGGEREKSQKQKNIDSSSCASSLSPLSPLILGDYWTNELLSPTISEDGLWKGDNSPSSVSTEFHTTATEESEYEDCSLARMPSFDPELIWEVLTN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02211 314 CDD AP2 105 165 IPR001471 GO:0003700|GO:0006355
Bva11g02211 314 Pfam AP2 domain 107 156 IPR001471 GO:0003700|GO:0006355
Bva11g02211 314 SUPERFAMILY DNA-binding domain 106 163 IPR016177 GO:0003677
Bva11g02211 314 ProSiteProfiles AP2/ERF domain profile. 106 163 IPR001471 GO:0003700|GO:0006355
Bva11g02211 314 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 314 - -
Bva11g02211 314 Gene3D AP2/ERF domain 106 164 IPR036955 GO:0003700|GO:0006355
Bva11g02211 314 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 6 314 - -
Bva11g02211 314 MobiDBLite consensus disorder prediction 204 241 - -
Bva11g02211 314 PRINTS Ethylene responsive element binding protein signature 129 145 IPR001471 GO:0003700|GO:0006355
Bva11g02211 314 PRINTS Ethylene responsive element binding protein signature 107 118 IPR001471 GO:0003700|GO:0006355
Bva11g02211 314 MobiDBLite consensus disorder prediction 265 285 - -
Bva11g02211 314 MobiDBLite consensus disorder prediction 265 290 - -
Bva11g02211 314 SMART rav1_2 106 169 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02211 Bva-Chr11 17950841 17952407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02211 8 314 AP2-EREBP Transcription Factor Family AT1G64380 47.143 2.76e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva11g02211 AP2 6.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02211 - - qlo:115975305 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02211 11 17950841 17952407 Bva11g02211 11 17950841 17952407 ECH