Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02208 ATGGATGACCGTCGACCTCAGAAACAGGCAAGCATCCGCTCAAGTACAACCTCCGAAGAAGTGAGCAGTACGGAGTGGGAATTGGCAGGGATGAGCGAGCAAGAAGAGGATCTCATCCACAGAATGTACAAGCTAGTTGGGAGCAGGTGGGATTTGATAGCGGGTCGCCTTCCTGGTCGTAAAGcagaagaaatagagagattCTGGATTATGAGACACGGTGATACTTTTGCTGATGATGGAAGAAATCAACATAGAGCTAATTA 266 0.4511 MDDRRPQKQASIRSSTTSEEVSSTEWELAGMSEQEEDLIHRMYKLVGSRWDLIAGRLPGRKAEEIERFWIMRHGDTFADDGRNQHRAN 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02208 88 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 1 82 - -
Bva11g02208 88 Gene3D - 32 73 - -
Bva11g02208 88 SUPERFAMILY Homeodomain-like 32 76 IPR009057 -
Bva11g02208 88 CDD SANT 31 69 IPR001005 -
Bva11g02208 88 MobiDBLite consensus disorder prediction 10 29 - -
Bva11g02208 88 SMART sant 27 75 IPR001005 -
Bva11g02208 88 Pfam Myb-like DNA-binding domain 32 70 IPR001005 -
Bva11g02208 88 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 82 - -
Bva11g02208 88 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02208 Bva-Chr11 17939562 17941012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02208 29 88 MYB Transcription Factor Family AT5G52600 48.333 6.59e-13 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva11g02208 Myb_DNA-binding 3.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02208 K09422 - twl:119981384 125.946