Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02207 ATGGAGAAAGCGTGGAGCTTGGAGCAGAACACTCTCGTGAGCGAGCTCATTCAGGGGATGGAGGTAGCTAGAAAGCTGAAGGCTGACTTGAGGATGACACCATCTTCGTTTGACAATAGGGACTTGTTGGTGCAGAGGATATTATCCTCTTATGAAAAGGCTCTACAAATTCTAACATGGAATGCGTCAAATTCCAAGTCGCAGCCGGTGGGGGCAACAACTGGAGCACCAGAGTCTCCAATATCTGTCAACGGAAGTCCTCTAAGAGACGAGCTTAAACCAGATTCAAAGAAAAGAAAGTCAACGGGCAAATGGATGGATCATGTTAGAGTGAGCTCCGAGACTGGCCTTGAAGGTCCCCATGATGACGGCTATAGCTGGAGAAAATATGGGCAGAAAGACATCCTTGGTGCCAAATATCCAAGATGTTATTATAGGTGCACCTACCGCAATAGCCAGAACTGCTGGGCCACAAAGCAAGTACAAAGATCAGATGAAGATGCTACTATGTTTGACATCATTTACCGAGGAAAGCATACATGTTTCCAAGGCAATAACGCCCTTTTGCCTCCAAAGAAACCTCAAAAACAGCAGAAACAGAAACCGGATAATGATGATAATCACCCTGGACAAGAAGGCTTGAGTGTTGATACCAATAACCTTGGAAACACAGATATGGCCTACCCTTTTGCTTTCTCCTCAACTTCGTTTGGATGCAGTACACAAGAAAACCACACCATTCTCCCTTTCCCACGTGATAACGATTCCTTCCTGTGCAGTCTTTCTCAAACACATCCATTATCTCCAACCACCCCAGAATTAAACTATTTCCCTTCCCCTTCTAACAAGTTGGATGGGGCCAATAACAAGCAATGTTCAGAATCTGATATCACCGGGATCGTTTCAGCCACCAATTCTCCAATTCCCGATTTCCATTTCTTACTTGATCAAGTGGAAATTGATCCAAATTTCTCATTTGATGCTCCGGATTTGTTCTCcta 1001 0.4436 MEKAWSLEQNTLVSELIQGMEVARKLKADLRMTPSSFDNRDLLVQRILSSYEKALQILTWNASNSKSQPVGATTGAPESPISVNGSPLRDELKPDSKKRKSTGKWMDHVRVSSETGLEGPHDDGYSWRKYGQKDILGAKYPRCYYRCTYRNSQNCWATKQVQRSDEDATMFDIIYRGKHTCFQGNNALLPPKKPQKQQKQKPDNDDNHPGQEGLSVDTNNLGNTDMAYPFAFSSTSFGCSTQENHTILPFPRDNDSFLCSLSQTHPLSPTTPELNYFPSPSNKLDGANNKQCSESDITGIVSATNSPIPDFHFLLDQVEIDPNFSFDAPDLFS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02207 333 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva11g02207 333 MobiDBLite consensus disorder prediction 90 107 - -
Bva11g02207 333 Gene3D WRKY domain 107 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva11g02207 333 SUPERFAMILY WRKY DNA-binding domain 120 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva11g02207 333 MobiDBLite consensus disorder prediction 65 122 - -
Bva11g02207 333 Pfam WRKY DNA -binding domain 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva11g02207 333 MobiDBLite consensus disorder prediction 196 210 - -
Bva11g02207 333 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva11g02207 333 MobiDBLite consensus disorder prediction 65 81 - -
Bva11g02207 333 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 328 - -
Bva11g02207 333 MobiDBLite consensus disorder prediction 185 220 - -
Bva11g02207 333 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 328 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02207 Bva-Chr11 17936815 17938564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02207 6 230 WRKY Transcription Factor Family AT4G23810 41.852 2.64e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva11g02207 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02207 - - gmx:100815760 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02207 11 17936815 17938564 Bva11g02207 11 17936815 17938564 ECH
Bva11g02207 11 17936815 17938564 Bva12g01983 12 15713752 15715770 ECH
Bva11g02207 11 17936815 17938564 Bva02g02014 02 21166103 21168542 ECH
Bva11g02207 11 17936815 17938564 Bva08g01907 08 12813091 12815407 ECH