Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02193 ATGATGTGGACCGAACCCATACAACACTCTTGCCGTGTAAATAAACCAAACAGAAACAGCTCGTTTCCTGCTGGAAAGGGTGGATTTGTCATCGCCGAGGCTGAGAAAATGGAAGTTCTACGCATTTTCTCTTCGATTTATCTACTGTCTTTAATTTTATGGCAAGGAAATGCGGAACCGGTTGAAGATAAGCAAGTTTTGCTTGAGTTTCTGAGCAATTTCCCTCCTTCTCGCCTTCTCAATTGGAATGAGAGCTCGTCAGTGTGTCGTAATTGGACTGGAGTGACTTGTAACGAAGACAAGTCTCGAGTAATAGCCATTCGATTGCCCGGGGTTGGATTCCATGGCCCGATTCCACCCAATACAATCAGCCGCCTCTCGGCCCTGCAAATTTTGAGTCTTAGATCCAATGTCATAACTGGCCATTTTCCGTCTGACTTCTCTAAACTCAAAAACTTATCTTTGCTCTATGTTCAATTTAACAACTTGTCCGGCCCTCTGCCTTCCGATTTCTCTATTTGGAAGAATCTTACTATTGTGAATTTGTCCAATAATCATTTCAATGGGAGCATTCCTTCATCGCTTTCTAAATTGACTGAGCTTGCTGGTTTGAATCTTGCAAACAACTCGCTTTCTGGTGATATTCCTGATCTCCAGTTGCCCAGATTGCAACAGTTGAATTTGTCTAACAATAATTTACAAGGCAGTGTGCCTAAATCCCTCCAGAAGTTTCCTAGATCAGCATTCCTTGGTAATAACATTTCTCTAGATCGTTCTCTTGACCTTCGTCCTGTACTTCCACCATCTTCTGAACCATCTCCAAAATCTAAGAAGCGTGGAAAACTGAGAGAGGCAGCACTATTGGGAATTATAGTTGCTGGTGCTGTTCTAGGGATCATAGCATTTgcctttttgatttttgtttgcagCTCAAGAAAGAACCACGCAGATGGCTTCTCCGGGAAGTTGCAGAAGGGACAAATGTCGCCAGAGAAAGCGGTTTCAAGGAATCAAGATGCAAATAATAAACTCGTTTTCTTTGAGGGATGCAATTATGCTTTTGACTTGGAGGATTTATTGAGAGCTTCTGCTGAGGTACTAGGCAAGGGAACATTTGGTACTGCTTACAAGGCTATACTAGAGGATGCAACCACAGTTGTTGTGAAGAGATTAAAGGAGGTAGCTGTTGGAAAGAAGGATTTTGAGCAACACATGGAGATCGTAGGAAGTCTTAAACATGAGAATGTTGTTGAACTGAAGGCATATTACTATTCCAAAGATGAGAAACTCATGGTGTATGAATACTACAGCCATGGGAGCATCTCTTCTATGTTGCATGGTAAAAGAGAAGATAGGGTGGCTTTAGATTGGGATACTAGGTTAAGGATAGCTCTAGGTGCTTCAAGAGGCATTGCTCGTATCCATGCTGAGAATGGTGGGAAGCTCGTACATGGCAACATAAGAGCTCCAGAAGTTGCAGATACCAGGAAAGCGGCGCAGCCTTcagatgtttatagttttggtgTGGTGTTACTGGAACTTCTGACTGGCAAATCCCCCATCCATACTACTGGTGGTGATGAGATTGTTCACTTGGTGAGGTGGGTTCATTCAGTTGTGCGAGAAGAGTGGACAGCTGAAGTGTTTGACCTTGAGCTCTTGAGATATCCTAACATAGAGGAAGAGATGGTGGAGATGTTACAGATTGCAATGTCATGTGTGGTTAGGTTCCCTGATCAGAGGCCTAAGATGTCAGAAGTCGtcaaaatgatagaaaatgtCAGGCAGATTGATACCCATAACCACAATCAGCCATCATCTCAGAATCAAGCTCAGAGTGTGACACCCTCATCAGTTTA 1859 0.4201 MMWTEPIQHSCRVNKPNRNSSFPAGKGGFVIAEAEKMEVLRIFSSIYLLSLILWQGNAEPVEDKQVLLEFLSNFPPSRLLNWNESSSVCRNWTGVTCNEDKSRVIAIRLPGVGFHGPIPPNTISRLSALQILSLRSNVITGHFPSDFSKLKNLSLLYVQFNNLSGPLPSDFSIWKNLTIVNLSNNHFNGSIPSSLSKLTELAGLNLANNSLSGDIPDLQLPRLQQLNLSNNNLQGSVPKSLQKFPRSAFLGNNISLDRSLDLRPVLPPSSEPSPKSKKRGKLREAALLGIIVAGAVLGIIAFAFLIFVCSSRKNHADGFSGKLQKGQMSPEKAVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVYEYYSHGSISSMLHGKREDRVALDWDTRLRIALGASRGIARIHAENGGKLVHGNIRAPEVADTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIVHLVRWVHSVVREEWTAEVFDLELLRYPNIEEEMVEMLQIAMSCVVRFPDQRPKMSEVVKMIENVRQIDTHNHNQPSSQNQAQSVTPSSV 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02193 619 PANTHER PROTEIN, PUTATIVE-RELATED 488 606 - -
Bva11g02193 619 PANTHER PROTEIN, PUTATIVE-RELATED 53 488 - -
Bva11g02193 619 Gene3D Transferase(Phosphotransferase) domain 1 360 487 - -
Bva11g02193 619 Gene3D Ribonuclease Inhibitor 176 262 IPR032675 -
Bva11g02193 619 SUPERFAMILY Protein kinase-like (PK-like) 365 602 IPR011009 -
Bva11g02193 619 Pfam Protein tyrosine and serine/threonine kinase 365 489 IPR001245 GO:0004672|GO:0006468
Bva11g02193 619 Pfam Leucine rich repeat 118 163 IPR001611 GO:0005515
Bva11g02193 619 ProSitePatterns Protein kinases ATP-binding region signature. 367 398 IPR017441 GO:0005524
Bva11g02193 619 SUPERFAMILY L domain-like 72 246 - -
Bva11g02193 619 MobiDBLite consensus disorder prediction 599 619 - -
Bva11g02193 619 Gene3D Ribonuclease Inhibitor 62 175 IPR032675 -
Bva11g02193 619 Gene3D Transferase(Phosphotransferase) domain 1 488 617 - -
Bva11g02193 619 ProSiteProfiles Protein kinase domain profile. 361 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g02193 619 Pfam Leucine rich repeat N-terminal domain 62 98 IPR013210 -
Bva11g02193 619 PANTHER OS05G0588300 PROTEIN 488 606 - -
Bva11g02193 619 PANTHER OS05G0588300 PROTEIN 53 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02193 Bva-Chr11 17869254 17872933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02193 37 619 Receptor kinase-like Gene Family AT4G23740 60.658 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva11g02193 PK_Tyr_Ser-Thr 6.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02193 - - gmx:100804799 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02193 11 17869254 17872933 Bva11g02193 11 17869254 17872933 ECH