Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02177 ATGGAGCAGAAAAGCCTTCTGCTATCGGCACTGGGTGTTGGGGTGGGCGTTGGAGTGGGGATTGGCTTAGCTTCTGGACAAAGCGTTGGCAAATGGGGAGCTAATAGTTCTTCCTCAAACGCCATTACTGCCGAGAAGATGGAGCAGGAAATGCTCCGACAAGTAATTGATGGAAGAGAAAGCAAGGTCACCTTTGATCAATTTCCTTATTATCTCAGTGAGCAAACAAGGGTATTGCTGACAAGTGCTGCTTATGTCCATTTAAAGCATGCTGAGGTTTCTAAATATACTCGTAATCTTTCTCCTGCAAGCCGGACTATTCTGCTCTCAGGGCCAGCAGAACTTTACCAGCAGGTGCTTGCCAAGGCTTTAGCCCATTTCTTTGAAGCAAAATTGCTTCTGTTAGATTTAACCGACTTCTCACTGAAGATTCAAAGTAAATATGGTTCTGCCAACAAAGAACCTGCTCTCAGAAGGTCCGCTTCAGAGTTTACTTTGGAGCGGTTATCTGGCTTGCTTGGATCATTTTCAGTTTTTCCACAAAGGGAGGAACCTAAAGGTTCAATACAGAGGCGGAGCAGTGGAGTGGACCTCCAATCAATGGGGACTGATGGATCTTCTAATCCTCCTAAGCTTCGCAGGaatgcttctgcttctgcaaaTATAAGTAGCCTTGGTTTTCAAAGCACTCCCACGAATCCAGCTCCTCTCAAGCGCACAACAAGCTGGTCTTTTGACGAAAAGCTTCTTGTACAGTCTCTTTACAAGGTTCTGACTTTTGTGTCAAAAACCTTTCCCATTGTGTTATATCTCAGGGATGTTGATAAGCTGTTACTTAGATCGCAAAGGATATATAACTTGTTCAGTAAAATGTTGGAGAAACTATCTGGACCAATTTTGGTTCTTGGTTCACGAATTGTGGATTCTGGTAATGACTACAGAGAGGTGAATGAGAGACTTGCGTCACTTTTCCCATATGATATAGACATCAGGCCTCCAGAAGATGAATCGCATACTGTCAGCTGGAAGTCCCAGTTAGAAGAGGATATGAAAATGATACAGGTTCAGGATAACCGAAACCATATCATGGAAGTACTTGCATCCAATGATCTTGACTGTGATGACCTGGATTCAATTTGTGTGGGAGACACGATGGTTCTTGGTAAATACATAGAAGAAATTGTTGTATCAGCAATTTCTTATCATTTAATGAAAAACAGAGACCCTGAATACAGGAATGGGAGACTTGTTCTATCTAGCAAGAGTTTGTCCCATGCATTGGGTATATTCCAGGAAGGGAAATCCAGTGGAAGAAGTACGCTAAAATTGGAAGCTCAAGCTGCAAAATCTGAGAAGGAAAGTGGGGAAGGAACTGCTGTGAAACCAGAAGCGAAGTCTGAAAACGCAGCTCCTGAAAAAATAACTGGAGCAGAAGTATCAACTTCAGCGGGGAACCCGGGTGGTGAAAATTCAGTTCCAGCATCCAAAGCTGCTGAAGTCCCTCCTGATAATGAGTTTGAGAAGCGAATAAGACCTGAGGTAATACCAGCAAACGAGATTTCTGTGACATTCAGTGATATTGGTGCCTTAGATGAGATCAAAGAATCCCTTCAGGAATTAGTAATGCTTCCTCTTCGAAGGCCAGACCTTTTCACTGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTATTTGGGCCTCCTGGCACTGGGAAGACAATGCTGGCAAAGGCCATCGCAAAAGAGGCTGGGGCAAGTTTCATTAACGTGTCGATGTCCACCATCACTTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGAGCATTATTTACACTGGCAGCCAAAGTCTCCCCAACCATTATATTTGTTGATGAGGTTGATAGCATGCTTGGGCAGCGAACCAGAGTTGGGGAGCATGAAGCCATGcggaaaataaagaatgaatttaTGACCCATTGGGATGGGCTCATGACAAAACCAGGAGAGCGCATCCTTGTTCTTGCGGCAACCAATAGACCGTTTGACCTAGATGAAGCAATTATTAGGCGTTTCGAGAGGAGAATTATGGTAGGAATGCCATCTGTGGAGAACAGGGAAAAGATTTTGAGGACTCTTTTGGCGAAAGAGAAGGTGGATGAGGGTCTCGACTTTAAGGAGCTCGCAACTATTACAGAAGGATATAGTGGAAGTGATCTAAAGAACTTGTGCACAACTGCCGCTTACCGGCCGGTTAGAGAATTAATCCAGCAAGAGAGACTAAAGACCCTGGAGAAGAAACAGAAGGCTGCCGAAGGGCAAGAGATAGAAGAGCAAGGTGAACAGGCCAGAGTTATTACCCTTAGGCCACTGAACATGCAGGACTTCCAAGAGGCCAAAAATCAGGTTGCCTCGAGCTTTGCAGCTGAGGGGGCTGGAATGAGTGAGTTGAAGCAGTGGAACGAGTTGTACGGGGAAGGTGGTTCCAGGAAGAAAGAGCAATTATCTTACTTCCTTTA 2498 0.4396 MEQKSLLLSALGVGVGVGVGIGLASGQSVGKWGANSSSSNAITAEKMEQEMLRQVIDGRESKVTFDQFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLSPASRTILLSGPAELYQQVLAKALAHFFEAKLLLLDLTDFSLKIQSKYGSANKEPALRRSASEFTLERLSGLLGSFSVFPQREEPKGSIQRRSSGVDLQSMGTDGSSNPPKLRRNASASANISSLGFQSTPTNPAPLKRTTSWSFDEKLLVQSLYKVLTFVSKTFPIVLYLRDVDKLLLRSQRIYNLFSKMLEKLSGPILVLGSRIVDSGNDYREVNERLASLFPYDIDIRPPEDESHTVSWKSQLEEDMKMIQVQDNRNHIMEVLASNDLDCDDLDSICVGDTMVLGKYIEEIVVSAISYHLMKNRDPEYRNGRLVLSSKSLSHALGIFQEGKSSGRSTLKLEAQAAKSEKESGEGTAVKPEAKSENAAPEKITGAEVSTSAGNPGGENSVPASKAAEVPPDNEFEKRIRPEVIPANEISVTFSDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGMPSVENREKILRTLLAKEKVDEGLDFKELATITEGYSGSDLKNLCTTAAYRPVRELIQQERLKTLEKKQKAAEGQEIEEQGEQARVITLRPLNMQDFQEAKNQVASSFAAEGAGMSELKQWNELYGEGGSRKKEQLSYFL 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02177 832 MobiDBLite consensus disorder prediction 192 215 - -
Bva11g02177 832 Pfam AAA+ lid domain 716 757 IPR041569 -
Bva11g02177 832 MobiDBLite consensus disorder prediction 183 215 - -
Bva11g02177 832 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 796 IPR027417 -
Bva11g02177 832 Gene3D - 694 794 - -
Bva11g02177 832 CDD AAA 560 692 - -
Bva11g02177 832 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 349 IPR027417 -
Bva11g02177 832 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 832 - -
Bva11g02177 832 MobiDBLite consensus disorder prediction 443 505 - -
Bva11g02177 832 ProSitePatterns AAA-protein family signature. 665 684 IPR003960 GO:0005524|GO:0016887
Bva11g02177 832 Pfam ATPase family associated with various cellular activities (AAA) 562 692 IPR003959 GO:0005524|GO:0016887
Bva11g02177 832 MobiDBLite consensus disorder prediction 445 460 - -
Bva11g02177 832 Gene3D - 521 803 IPR027417 -
Bva11g02177 832 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 832 - -
Bva11g02177 832 SMART AAA_5 103 334 IPR003593 -
Bva11g02177 832 SMART AAA_5 558 695 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02177 Bva-Chr11 17787383 17794325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02177 522 767 Calmodulin-binding Proteins AT3G56690 38.153 1.91e-43 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02177 - - gmx:100807464 1326.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02177 11 17787383 17794325 Bva11g02177 11 17787383 17794325 ECH