Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02155 ATGCATTGcaaatttgaatttgtcGATTTGATCTTATGTTCGGATCATTACAGAGAAGAATCGTCGGGAGaGGGAGTTTGGTGTGCAAAGAAGGACTTCAATCTGGCAAAACACCCCGAGATTGATGTGCCGAATCTGCAGGCGATTAAGCTGATGCAGAGCTTCAAGCCGAGGGAATACGTGCGTGAGACCTTTGCTTGGATGCACTACTACTGGTTTCTCACCAATGATGGCATTGAGTTCCTTAGAAATTACTTAAATCTTCCTTCCGAAATTGTGCCTGCTACTTTGAGGAAACAGGCAAAGCCCGCTGGGGCCCTTCTCGCATTGAAGGAGAGAGGAAATTTGGCGACCGAGATGGATACCGTCGAGGTTCTCAAGGGCCTGGTGGTGACTTCGGAGACAAGGGTGGTGCACCTGCTGACTGGTCCTGGTGGAAGTCCTGGCTTCGGTCGTGGTTCTGGCGGTTACGGAGCGGCAACTACTTCAAATCTTTCTTA 500 0.484 MHCKFEFVDLILCSDHYREESSGEGVWCAKKDFNLAKHPEIDVPNLQAIKLMQSFKPREYVRETFAWMHYYWFLTNDGIEFLRNYLNLPSEIVPATLRKQAKPAGALLALKERGNLATEMDTVEVLKGLVVTSETRVVHLLTGPGGSPGFGRGSGGYGAATTSNLS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02155 166 Pfam Plectin/S10 domain 24 100 IPR005326 -
Bva11g02155 166 Gene3D - 15 107 IPR036388 -
Bva11g02155 166 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 24 105 - -
Bva11g02155 166 PANTHER 40S RIBOSOMAL PROTEIN S10 24 105 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02155 Bva-Chr11 17684890 17686706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02155 24 102 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 84.810 2.50e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02155 K02947 K09422 gmx:100803556 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02155 11 17684890 17686706 Bva11g02155 11 17684890 17686706 ECH