Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02150 ATGGCTCGAGAGCTGTGTGAAGATAAATCGAGGGATATGGTATCATCATCGGCTGGATTCTGCTACTCGGAAGTATCATCAGGTTCTGGTAACCCAATGATTCAAACCCAGATGGTGAACCAGATCCCAGGCTTTGTCTCCGACTCTGACACAGACGTGTTCAACCTCAGCACAGGCATGGAGATGATAGGGTTTTCCAAGAATCTACAGGCACAGCAACAAACTGACACTAACCCCCTGATGTGGAAGAGTTTCATCGCCAAAACTGGAGGACCCTCCTCCTCTTCCAAGACCACCAATTTCTATCATCATCAGGACTATCATAAACCAGATTTCGCATCTGCTATTTCCGAAACAAGCAGCGACAATCTAATAGTTGCGTCTCATGACCCATCCGCCCCTTGGCAAGACAACAACAGATTATTAGTTGATGATTCGTCTTTGAGATGTGTGTTTACGTGCGAAGGAAATGAAAGGCCTAGTCAAGGCCTCTCGCTCTCTCTTAGTTCAACCAATCCTTCAAGTATTGGCTTACAATCTTTCGAACTCAGGCAAACGAATCATCACCTGCAGAACCAACATGATCTTGTTTCTTCAACTTGTAGAGATGCTTTCTTCGGAAAAACGCCCAACAGTACTCAACAGCAACAGCAAATGTTGCAGGATGGGTATTTGGGTAAATCTGCTGCAAATCTTTATCATGGACAAGGACATTTCCTGCTCAAGAACTCCAAGTACTTGGTCCCAGCACAGGAGCTTCTGAACGAGTTCTGCAGTCTTGGAACAAACCCAAGTGATGTACTAAAGCAAAAGTCTCAAAAGAACAAGCAGTGGGAAGAGGATAGCGGCAGCAGTTCCTCAAAGAAGCATGTGCTTAGCTCCTTAGAATTCGCGGAATTACAGAAGAGGAAGACAAAGCTGCTTTCTATGCTGGAAGAGGTGGACAGAAGATACAGGCACTACTGTAATCAGATGAAGGCAGTTGTGTCATCGTTTGAAGCAGTGGCTGGGCATGGAGCGGCTGCAGTGTACTCAGCGCTTGCTTTGAAAGCCATGTCAAGGCATTTTAGATGTTTGAAAGATGGGATTTTGAGTCAGATTCAGGCGACAAGGAAAGCCATGGGTGAGAAAGACCCAATTGCACCAGGTACAACAAAGGGCGAAACACCAAGACTTAAAATCATTGACCAAGCAATCAGACAACAAAAGGCCTTCCAGCAAATGAGCATGATGGAAAGCCATCCATGGAGACCCCAACGTGGCCTTCCTGAGAGATCCGTCTCAGTTCTTCGGGCTTGGCTTTTCGAGCATTTCCTCCACCCGTACCCAAGTGATGTtgataaacatattttagCCCGCCAAACCGGTCTCTCAAGAAGCCAGGTATCAAATTGGTTTATTAATGCAAGGGTGAGACTGTGGAAACCAATGGTGGAAGAAATGTATTTGGAAGAAGTGAAGGAGCGTGAAAACAACATGGATTCCTCGAAGGGGGTCACCGATCCCCAAGAGGACAACCCATCCTTAAATCGACCTGAAGATGAGAAGCCCACACCTGGTCGACTTGTACGGATTGACTCCGAGTGCGTATCCTCCATCGTTAATAACTCCTCAGAAGTACACAAAGATGATCCATTTGCAAAAAGCAGTAAGACCCTCCAAAACCACCACCATATCCAGCAAGACCAATGCATGGGGCGAGTCACAGACACTTTTGGATCCATGGAGCTTGATTTTTCATCATACACTACTGCTAATCACCACTCAGCAGGCATGGTTTCCTACGCCAATGATAATTTCAACGCCGGTGGAGTGTCGCTGACGCTAGGGTTACAGCAACACGGTGGAAACGGGGTGAGCTTGGCTTTCCCACCACCCACTCACGGTTCACTCTTCTACCCAAGGGAGCAAATGGAAGATTGTCAACCAGTTCAGTACTCGCTTTTGGACGGCGAAGGACAAAATCTTCCGTACAGAAATTTGATGGGTGCACAGTTGCTTCATGATTTGGCAGGATA 2018 0.4643 MARELCEDKSRDMVSSSAGFCYSEVSSGSGNPMIQTQMVNQIPGFVSDSDTDVFNLSTGMEMIGFSKNLQAQQQTDTNPLMWKSFIAKTGGPSSSSKTTNFYHHQDYHKPDFASAISETSSDNLIVASHDPSAPWQDNNRLLVDDSSLRCVFTCEGNERPSQGLSLSLSSTNPSSIGLQSFELRQTNHHLQNQHDLVSSTCRDAFFGKTPNSTQQQQQMLQDGYLGKSAANLYHGQGHFLLKNSKYLVPAQELLNEFCSLGTNPSDVLKQKSQKNKQWEEDSGSSSSKKHVLSSLEFAELQKRKTKLLSMLEEVDRRYRHYCNQMKAVVSSFEAVAGHGAAAVYSALALKAMSRHFRCLKDGILSQIQATRKAMGEKDPIAPGTTKGETPRLKIIDQAIRQQKAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEVKERENNMDSSKGVTDPQEDNPSLNRPEDEKPTPGRLVRIDSECVSSIVNNSSEVHKDDPFAKSSKTLQNHHHIQQDQCMGRVTDTFGSMELDFSSYTTANHHSAGMVSYANDNFNAGGVSLTLGLQQHGGNGVSLAFPPPTHGSLFYPREQMEDCQPVQYSLLDGEGQNLPYRNLMGAQLLHDLAG 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02150 672 SMART prehox3 235 365 IPR006563 -
Bva11g02150 672 SUPERFAMILY Homeodomain-like 417 482 IPR009057 -
Bva11g02150 672 SMART HOX_1 416 480 IPR001356 GO:0003677
Bva11g02150 672 Pfam Homeobox KN domain 433 472 IPR008422 GO:0003677|GO:0006355
Bva11g02150 672 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 628 - -
Bva11g02150 672 MobiDBLite consensus disorder prediction 507 522 - -
Bva11g02150 672 ProSiteProfiles 'Homeobox' domain profile. 413 476 IPR001356 GO:0003677
Bva11g02150 672 Gene3D - 419 481 - -
Bva11g02150 672 Coils Coil 297 317 - -
Bva11g02150 672 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 1 628 - -
Bva11g02150 672 Pfam Associated with HOX 241 363 IPR006563 -
Bva11g02150 672 MobiDBLite consensus disorder prediction 488 522 - -
Bva11g02150 672 CDD homeodomain 416 477 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02150 Bva-Chr11 17667100 17671119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02150 38 671 Homeobox Transcription Factor Family AT5G41410 44.714 2.53e-141 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bva11g02150 POX 4.3e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02150 - - tcc:18606572 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02150 11 17667100 17671119 Bva11g02150 11 17667100 17671119 ECH