Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02147 ATGGGATTTCCAGTGGGGTGTACGGAGATGGTGTTTCCAAAGCTCTTTCTTCACATCCTTTCTATGTTGGGTTTCATCAAAAAACTCGTATCCCTCGTGTTCCGCTATCTGGGTCTCCACGACCACGATTTCCTTGAACCAGATATTGCGTGGCCGAACCGGGTGCCCGAATTCCAATTCTTTCCTGCAATGTTGATCCGAGAAATCTTGCCGGTCGTTAAGTTCTCAGAACTGCTAATGGACCTCGACCCTCGTGATACCTGTGCTGTCTGTCTTTATGAATTCCAGGCTCACGACGAGATCAGACGCCTCACAAACTGTCCACATATATTCCACCGGAGCTGCCTCGACCGTTGGATGGGATACGATCACAGGACGTGTCCCTTGTGCCGCACACCCATCATACCTCACGATATGCAAGGCCCCTTCAATGAGAGTCTCTGGGCTGCTTCTGGAATCCCTGAATTTTATGCAGATTATTCTCATTCTGCTGCCTTTTA 500 0.492 MGFPVGCTEMVFPKLFLHILSMLGFIKKLVSLVFRYLGLHDHDFLEPDIAWPNRVPEFQFFPAMLIREILPVVKFSELLMDLDPRDTCAVCLYEFQAHDEIRRLTNCPHIFHRSCLDRWMGYDHRTCPLCRTPIIPHDMQGPFNESLWAASGIPEFYADYSHSAAF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02147 166 Pfam Ring finger domain 86 131 IPR001841 -
Bva11g02147 166 SMART ring_2 88 130 IPR001841 -
Bva11g02147 166 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 161 - -
Bva11g02147 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 135 IPR013083 -
Bva11g02147 166 SUPERFAMILY RING/U-box 87 139 - -
Bva11g02147 166 ProSiteProfiles Zinc finger RING-type profile. 88 131 IPR001841 -
Bva11g02147 166 PANTHER BRH1 RING FINGER PROTEIN 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02147 Bva-Chr11 17653976 17654954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02147 1 152 C3H Transcription Factor Family AT1G63840 51.899 6.42e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02147 K16281 - jre:109014495 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02147 11 17653976 17654954 Bva11g02147 11 17653976 17654954 ECH