Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02145 ATGTCTTCTGATCTGTATTTTTTTGATGCTTCATTCCATCGACATTCAAGTTCAGACATTGTCTCCTCTGATGGAGGCGAAGACCTTCTGTTTTCATCTGAGTCTTTCCCATTCCCATTCCCATTCTTAACTACCCCTCCCATTGATGTCTCTCAAGAGATATCCAACCATCAAACACAACAAAACCCACTCAATGAAACTCCTTCTCTCGACTCCTTATCTCCatccttctttaatttttctcctcCGAGTAGCCACTTGGAAAGTTTGAGCCGTTATCAGGCTAATCATGCGGTGCCTCAGCCTCTGTCTAATGGCCCAAATTTAGAGAGTGAGTTTGGCAAGTTCTCTGTTTTGGATGAGTTAGAGCTGAAAAGTGAGGAATGCCAAATGGGTGTGGATTACAACTACAGTCACCAATTTGCTCCTCACAGTTACAGTGGTGCTGGGAATATATCAAAGTTCATGCAAAGGAGCTTCAGCAGTGAATCCTTTGGCGGGAAGGCTGGCTTTTTCTGTCAACCTCACTATGAAACTGTGATGGACTCCCCAAATTTTCAAAGCCAGTCCTTAAGCTCTGGCGAAAACAGTTTCTTCAGTGGCCAGATGAGGAGGGTGTGTAGCACAGGAGATTTGCAGAATATGAAAGAGATTAATAGGTCACACATGGACGGGTCGTTCTTGGAGGAAGCGAACTTCAAAGTAGGGCGTTACAGTGccgaagaaagaaaagagagaatctCCAAATACAGAGCCAAGAGAAGTCAGAGAAACTTCAACAAGACTATTAagTATGCATGCCGAAAGACACTAGCCGACAATCGACCGCGCATACGTGGCAGATTCGCGCGCAACGACGAGACCGGCGAAACCCACAAGGCTCCATGTTCGAGCAGAGATGAAGACGAAGACGAGTTCTGGATTGAAGGGCTGCACGAGCACGAAGAACAAGATCAGGATATAACAGTTGGAGCAGAAGAGTATGTAAACAGTTACGGAGGTCCTGATCAGTTCCAGTACTATGGCTATTG 1031 0.4374 MSSDLYFFDASFHRHSSSDIVSSDGGEDLLFSSESFPFPFPFLTTPPIDVSQEISNHQTQQNPLNETPSLDSLSPSFFNFSPPSSHLESLSRYQANHAVPQPLSNGPNLESEFGKFSVLDELELKSEECQMGVDYNYSHQFAPHSYSGAGNISKFMQRSFSSESFGGKAGFFCQPHYETVMDSPNFQSQSLSSGENSFFSGQMRRVCSTGDLQNMKEINRSHMDGSFLEEANFKVGRYSAEERKERISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDETGETHKAPCSSRDEDEDEFWIEGLHEHEEQDQDITVGAEEYVNSYGGPDQFQYYGY 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02145 343 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 35 333 IPR045281 GO:0009909
Bva11g02145 343 MobiDBLite consensus disorder prediction 283 305 - -
Bva11g02145 343 Pfam CCT motif 243 285 IPR010402 GO:0005515
Bva11g02145 343 MobiDBLite consensus disorder prediction 283 301 - -
Bva11g02145 343 ProSiteProfiles CCT domain profile. 243 285 IPR010402 GO:0005515
Bva11g02145 343 PANTHER CCT MOTIF FAMILY PROTEIN 35 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02145 Bva-Chr11 17646161 17647994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02145 239 292 C2C2-CO-like Transcription Factor Family AT5G24930 50.000 2.82e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva11g02145 CCT 9e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02145 - - pop:7458191 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02145 11 17646161 17647994 Bva11g02145 11 17646161 17647994 ECH