Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02142 ATGGGTGGTTGCTGTTGTTGTTCTTCCAAAGGAACTGAATTGAACGGTCCACCATCATACTTCTATTACCCAAGAGCATCAGACGAGCGTGTTCCACTATCACCTCACCAGGCCGCTGCATCTGCTTTCTCTGGGGGACTCCTGGTTGATACTAATCTAGACACTTCAATTCCCGATACCTATAGACCACCTCCTGCTCCTATCCCTTTCAATGCTACATTTATTGTTAGTCAAACTCCACCTGCGGCGCAAGAAATTTATGGCAACAAGACAAACGGATCCCCGCGTTCTACGAATTCTAATTCAGTTCAGGAAACAGTTTCTGGTGACAATCATGGAACTGTGGCTAAGTTGGAAGAGCTGAAGGAATCAGAAAGCAAAATTGAGGTTGATTTAGAACTTGACCCGGCAAAGGGTTCAGAAATTCAACTTCCAAAGTTGGCAGAACCTATCATTTCAGAAGAGGACGATGGATGTCCAATTTGTTTAGAAGAGTATGATGCAGAAAATCCAAAACTCACTGCAAAATGCGACCATCATTTTCACCTTGCTTGCATTCTGGAATGGATGGAAAGAAGTGAAGCTTGTCCTGTATGTGATCAGGCTATGGTTTTCAACCCTCCAATTGAGTTATA 635 0.4346 MGGCCCCSSKGTELNGPPSYFYYPRASDERVPLSPHQAAASAFSGGLLVDTNLDTSIPDTYRPPPAPIPFNATFIVSQTPPAAQEIYGNKTNGSPRSTNSNSVQETVSGDNHGTVAKLEELKESESKIEVDLELDPAKGSEIQLPKLAEPIISEEDDGCPICLEEYDAENPKLTAKCDHHFHLACILEWMERSEACPVCDQAMVFNPPIEL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02142 211 MobiDBLite consensus disorder prediction 85 109 - -
Bva11g02142 211 ProSiteProfiles Zinc finger RING-type profile. 159 200 IPR001841 -
Bva11g02142 211 SMART ring_2 159 199 IPR001841 -
Bva11g02142 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 205 IPR013083 -
Bva11g02142 211 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 210 - -
Bva11g02142 211 SUPERFAMILY RING/U-box 148 206 - -
Bva11g02142 211 Pfam Ring finger domain 159 199 IPR001841 -
Bva11g02142 211 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02142 Bva-Chr11 17628191 17631209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02142 1 210 C3H Transcription Factor Family AT5G41350 51.402 6.22e-67 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02142 - - gmx:100816369 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02142 11 17628191 17631209 Bva11g02142 11 17628191 17631209 ECH