Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02133 ATGCCATCATGGTGGGGGAAATCTTCGTCCAAAGAAGTGAAGAGGAAAGCAAATAGGGAAAGTTTTATTGATACAATTCAGCGGAAATTCAAAAGTGGTTCTGAAGAGAAGAGCAATGACAAATCAGGAGGGTCTCGTAGACGTGGCATTGACACTGTCTCAGAGAAGGGATGCAGGTCCCTTGTACCTTCAAGATCACCATCCCCGTCTGCACATGTGTCACGCTGTCAAAGTTTTGCAGAAAGGCCCCACCCCCAGCCACTCCCTCTGCCTGATTTGCATCTTTCTACCATCAATCGTACAAATTCTGCCATTAATGTAACATCAAAGCCAGACAAGGCGAAGGGTGTTAAGCCATCTCTGTTTCTTCCCCTACCAAAACCTGGATGTGCTCCTAACAGTGGAGGACCTACAGATGCTGAGGGAGACATAGCCACTGCTTCTGTTTCCAGTAACAGTTCTATTGATAGTGATGACCCATCTGATTCACGTCTCCTTAGTCCACTAGCCTCTGACTGCGAAAATGGAAACAGAACCACTTTTAGGAGTTCTTTCAGCAAGCTGCACAAGGATCAATCAGCCTTTTCCATCAAAAAGAAGTCAAAAGCTTCCTCAAAACCAGCTCCTCAAGTATGCGATAATACCTCACCTAAAGGAGGGCCAATGCATGTGCAAAATCTGCAAATAGTTCGCCCATGTGGTTTATGCAGTGCTCCGGATAGTTCTATGTCGAGTCCTTCTAGAAGTCCTATGAGAACATTTGGTGGTGATCAAGTTTTAAACTCTGGATTCTGGTCAGGCAAGGTTTATCAGGATGTTGCCAGTGGGCACTGCTCAAGTCCAGGTTCCGGTCAGAATTCAGTAGGGGGAGATCTTTCTGGACAGATATTTTGGCCGCAAAGCCGTTGTAGCCCTGAGTGTTCTCCAATACCCAGTCCTAAACTGACTAGCCCTGGTCCCGGCTCCAGGATACACAGTGGTGCTGTCACCCCTCTGCACCCACGAGCTGGAGGGCCTGCAACAGAGTCACCTACAAGACAAACTCACAGATTACCTCTTCCTCCAATATCAATAGCTAATTCTTGTCCTTTTTCTCCAACATATTCTGCAGCAACAACTCCTTCAGCCCCTCGTAGTCCTAGTAGAGCAGAACATCCTTTGAGTCCAGGTTCACGTTGGAAAAAGGGCCAATTGCTTGGAAGAGGAACATCTGGGCATGTATATCTTGGTTTTAACAGTGAGAGTGGTGAGATGTGTGCAATGAAGGAGGTAACTCTTTTTTCAGATGATGCAAAATCGAGGGAAAGCGCACAGCAACTTGGTCAAGAAATTGCAATGTTAAGTCGCTTGCGTCATCCAAATATAGTCCAGTATTATGGATCTGAGACgGTGGATGACAAACTCTACATCTACTTGGAATATGTCTCCGGTGGGTCAATATATAAACTGCTTCAAGACTACGGCCAGCTTGGAGAAATTGCTATTCGTAATTATACTCGACAAATTTTGTCGGGTCTTGCATATTTACATGCTAAAAACACTGTCCATAGGGACATTAAAGGAGCAAACATATTGGTAGATCCTAGTGGGCGGGTGAAATTGGTAGATTTTGGGATGGCAAAGCATATAAATGGACAACCATTTTCTTTCAAGGGAAGTCCTTACTGGGTGGCACCAGAGGTtatcaaaaattcaaatggttGTAGTCTAGCTGTCGACATATGGAGCCTCGGATGCACCGTTTTGGAGATGGCTACAACAAAACCACCTTGGAGCCAGTATGAAGGGGTTGCTGCCATGTTTAAGATTGGGAACAGCAAGGAACTTCCTGCAATTCCGGATCATCTATCAGAAGATGGAAAGGATTTTGTGAGACTATGTTTGCAAAGAAACCCGTCACATCGTCCTACAGCTGCTCAACTTCTGGAGCATCCATTTGTTAAAAATGCTACACCGGAAAGACCAATTGTAAATGGTGATCTTTCAGAACCACCGCCTGCTGTTGCAGACGCAGTGAGATCACTGgCCATTGGACCTGCAAGACATAATTCATGCTTAGACTCAGAAGGGGCTGGTATCTATTCGTCTAGAAGCTTGAAAGTGGGTTCAGGATCAAGTGATTCCCATTCGCCGAGGAACATATCAGGTCCCGTTTCTCCCAGTGCGAGCCCACTTTTGCATTCTAGAGCAGCACATACGAGCGGAAGGATGTCCCCTTCTCCTATATCTAGCCCTCGTACTGCTTCCGGTTCTTCCACACCGCTCACTGGTTGCAGTGGGGCAATCCCATTTCTAACAAAGCTGCTCACATTCTCATATAATGGCCATGACCCATTTTGGGGGATTTCACAAACCTCTCATGCTTACGGGGATATAACTTCGTCTGACATTAGGAGGCCTGTGAGTGTCCAGGGAGATCCAAGAGATTTCTACCATGGAAAATCATTATTGGATGATTGCGTGTCACAACAGTTGCTAAGGGATCATGTAAGGCTAAATTCATCTCTAGATCTTAAGCCCAGTGCCCCAACGCTGGGCCGCATAAATGGCTTATG 2555 0.4568 MPSWWGKSSSKEVKRKANRESFIDTIQRKFKSGSEEKSNDKSGGSRRRGIDTVSEKGCRSLVPSRSPSPSAHVSRCQSFAERPHPQPLPLPDLHLSTINRTNSAINVTSKPDKAKGVKPSLFLPLPKPGCAPNSGGPTDAEGDIATASVSSNSSIDSDDPSDSRLLSPLASDCENGNRTTFRSSFSKLHKDQSAFSIKKKSKASSKPAPQVCDNTSPKGGPMHVQNLQIVRPCGLCSAPDSSMSSPSRSPMRTFGGDQVLNSGFWSGKVYQDVASGHCSSPGSGQNSVGGDLSGQIFWPQSRCSPECSPIPSPKLTSPGPGSRIHSGAVTPLHPRAGGPATESPTRQTHRLPLPPISIANSCPFSPTYSAATTPSAPRSPSRAEHPLSPGSRWKKGQLLGRGTSGHVYLGFNSESGEMCAMKEVTLFSDDAKSRESAQQLGQEIAMLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQDYGQLGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPSGRVKLVDFGMAKHINGQPFSFKGSPYWVAPEVIKNSNGCSLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPAIPDHLSEDGKDFVRLCLQRNPSHRPTAAQLLEHPFVKNATPERPIVNGDLSEPPPAVADAVRSLAIGPARHNSCLDSEGAGIYSSRSLKVGSGSSDSHSPRNISGPVSPSASPLLHSRAAHTSGRMSPSPISSPRTASGSSTPLTGCSGAIPFLTKLLTFSYNGHDPFWGISQTSHAYGDITSSDIRRPVSVQGDPRDFYHGKSLLDDCVSQQLLRDHVRLNSSLDLKPSAPTLGRINGL 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02133 851 SMART serkin_6 393 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g02133 851 CDD STKc_MEKK1_plant 392 647 - -
Bva11g02133 851 MobiDBLite consensus disorder prediction 144 161 - -
Bva11g02133 851 MobiDBLite consensus disorder prediction 9 54 - -
Bva11g02133 851 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 786 - -
Bva11g02133 851 MobiDBLite consensus disorder prediction 699 753 - -
Bva11g02133 851 MobiDBLite consensus disorder prediction 303 398 - -
Bva11g02133 851 Gene3D Transferase(Phosphotransferase) domain 1 391 662 - -
Bva11g02133 851 Pfam Protein kinase domain 394 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g02133 851 MobiDBLite consensus disorder prediction 59 75 - -
Bva11g02133 851 ProSitePatterns Protein kinases ATP-binding region signature. 399 422 IPR017441 GO:0005524
Bva11g02133 851 SUPERFAMILY Protein kinase-like (PK-like) 391 724 IPR011009 -
Bva11g02133 851 MobiDBLite consensus disorder prediction 1 173 - -
Bva11g02133 851 MobiDBLite consensus disorder prediction 276 295 - -
Bva11g02133 851 MobiDBLite consensus disorder prediction 196 220 - -
Bva11g02133 851 ProSiteProfiles Protein kinase domain profile. 393 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g02133 851 MobiDBLite consensus disorder prediction 95 109 - -
Bva11g02133 851 MobiDBLite consensus disorder prediction 360 379 - -
Bva11g02133 851 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02133 Bva-Chr11 17595743 17601533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02133 1 849 MAP Kinase Kinase Kinase AT1G63700 62.416 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva11g02133 Pkinase 1.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02133 K20717 - vvi:100263296 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02133 11 17595743 17601533 Bva11g02133 11 17595743 17601533 ECH