Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02131 atggGTCGCGGAAGATTGCCTGTGATATTCatggaaagagagaaatcCCGTAAGGCGACTTTTACGAAGAGGACACAGggaataaagaagaaattttttgaactttCGAGAGTTAATGCTGCCATGATAACCTATGACTCAGAATCTGCGAATGCCAGACCGTGCCCTAATAACGACTATAAGCTGAAAGCTTtcttagaagaaagaaagagcaaaattgaaggaaaagatCCGCGAGGTACGCCTAGGGAAAAGCACCAGCTGAAGCAGTCGCAACTTGGATCTGGAACCCACGTGCCTCAGCGCCAACTTAGCCTTGCTGCTACTATGGTTGAGCCAAATCCACTGCCAATAGACAATGAAATGCTGGATTTTTGGAGTGGATTCAATCCAGCTAGTTATTATGATGGAATGCAATTTCAGAATAACAACTATTATCCTGCCGAACCTGGTCTATA 458 0.3799 MGRGRLPVIFMEREKSRKATFTKRTQGIKKKFFELSRVNAAMITYDSESANARPCPNNDYKLKAFLEERKSKIEGKDPRGTPREKHQLKQSQLGSGTHVPQRQLSLAATMVEPNPLPIDNEMLDFWSGFNPASYYDGMQFQNNNYYPAEPGL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02131 152 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 36 IPR002100 GO:0003677|GO:0046983
Bva11g02131 152 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bva11g02131 152 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bva11g02131 152 SMART madsneu2 1 57 IPR002100 GO:0003677|GO:0046983
Bva11g02131 152 ProSiteProfiles MADS-box domain profile. 1 44 IPR002100 GO:0003677|GO:0046983
Bva11g02131 152 MobiDBLite consensus disorder prediction 71 86 - -
Bva11g02131 152 Gene3D - 14 92 IPR036879 GO:0003677|GO:0046983
Bva11g02131 152 MobiDBLite consensus disorder prediction 71 99 - -
Bva11g02131 152 SUPERFAMILY SRF-like 1 62 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02131 Bva-Chr11 17586683 17587432 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bva11g02131 SRF-TF 9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02131 - K19990 lang:109350953 48.1358