Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02128 ATGGTACCAGAGAATCTGAAGAAACAACTTGCTTTGGCTGTTAGAAGCATTCAGTGGAGCTACGCTGTCTTCTGGACTGTTTCAGCTAGCCAAACAGGAGTTTTGGAATGGGGTGAAGGATATTACAATGGGGATATTAAAACTAGGAAAACAAGTCAAGCAGTAGAACTTAATTCAGACGAAATAGGTTTTCAGAGAAGCGAGCAGCTGAGAGAGTTATACGAGTCCCTTGCAATTGCAGAAGCCAGCCCCCAAGCTAAAAGGCCTTCATCGGCATTATCACCTGAAGATCTCACAGATACGGAATGGTATTACTTGGTTTGTATGTCCTTCGTATTCAACATTGGCCAAGGgtCACCAGGAAGAACTCTAGCGAATGGCCAACCCATCTGGCTGTATAATGCCCCTTCTGCTGATAGTAAAGTATTTAGTCGGTCCCTTCTGGCGAAGAGCGCATCCATTCAGACAGTGgtgtgttttccttttctggatGGTGTTATAGAGCTAGGTGCGACTGATCTGgtTTCAGAAGATCTCAGTCTCATTCAACATATAAGAACTTCTTTCTTGGATATTTTGGACACCGAAGTTCCCAAGAAGTTTAGAGCTGCATTAAACACAGGAAATGACAACGATGATGCTTTTGACATTAAATTAACTCCCAAAGTGAGATGTGAAGTACCCAAGACAAGTTCTCCTAATAGTATTTCGGATGCATTTGAATCCAATCAAGCAGCTGACGAGGCATTCATGGTTGAAGGCACAAATGGAGGCGCTTCCCATGTCCAAAGCTGGCAAGCTCTGGATGATGAATTGAGTAATTGTGTTCATAATTCCATGAATTCTAGCGACTGCATATCTCAAACTTTTGCCAGTCCTGTTCACAAGGGTGAAAATCCAATTGACCTTCAAGAGTGCAATAACACAAAAATGACTTTAATGGATCCTCAGAGTGATCATCGACATTATCAGACAGTTCTTTCTACCCTTCTAAAGAGCTCAGACCAGTTAATTATGGGACCCCGTTTACGAAATTCTCATCAAGAATCCAGCTTTGTCAGTTGGAAGAAAGAAGGATTAATGGGTTGTGAAAGGACAAGAGAAGGAGCCCCACAAAAGGTATTGAAAAAGGTACTGTTTGAAGTTCCTCGGATGCACATGGATGGGCTGCTCGAGtctcaagaagaaaatgactaTAAAGAGGGAATGAAACCAGAGGCTGATGAGATTGGCATGAACCACGTATTGTcagagagaaggagaagagcAAAACTaaatgaaagatttttaattcttaGATCAATTATCCCTTCAATCAGTAAGgaTGACAAAGTTTCAATACTAGATGATGCAATAGAGTACCTTAGAAAGCTTGAGAGAAGGGTCAGAGAGTTGGAAGCCCGCAGGGAGCTTATAGATTTAGAGACTAGAACTAAAAGAACACCTCAAGATATGGTTGAGAGGACTTCTGATAACTATTTTAACAACAAAACTGATAAAGGGAAGAAACCAATGAAGAGGAAGGCTTGTGACATTGATGAGACAGGGCGAGAGATTGACTCCATTGTGTCAAAAGACACTTGTACTATTAATGTTACTATCAATACGAGTGACAATGAAGTTCTGATTGAAATGAAGTGTTCTTGGAGAGAAGGAGCGCTTCTGGAAATTATGGAAGCAGTAAGCAGTCTCCatttagattttctttctgttcaGTCATCAAAAGCTGATGGAAATCTTCATCTGACCATCAAGTCAAAGTTTAGAGGATCGACACCTGTATCCGCGAAAAAGATCAAACAAGCACTCCACGAGGTGGCTTGCAAGTGTTG 1832 0.3941 MVPENLKKQLALAVRSIQWSYAVFWTVSASQTGVLEWGEGYYNGDIKTRKTSQAVELNSDEIGFQRSEQLRELYESLAIAEASPQAKRPSSALSPEDLTDTEWYYLVCMSFVFNIGQGSPGRTLANGQPIWLYNAPSADSKVFSRSLLAKSASIQTVVCFPFLDGVIELGATDLVSEDLSLIQHIRTSFLDILDTEVPKKFRAALNTGNDNDDAFDIKLTPKVRCEVPKTSSPNSISDAFESNQAADEAFMVEGTNGGASHVQSWQALDDELSNCVHNSMNSSDCISQTFASPVHKGENPIDLQECNNTKMTLMDPQSDHRHYQTVLSTLLKSSDQLIMGPRLRNSHQESSFVSWKKEGLMGCERTREGAPQKVLKKVLFEVPRMHMDGLLESQEENDYKEGMKPEADEIGMNHVLSERRRRAKLNERFLILRSIIPSISKDDKVSILDDAIEYLRKLERRVRELEARRELIDLETRTKRTPQDMVERTSDNYFNNKTDKGKKPMKRKACDIDETGREIDSIVSKDTCTINVTINTSDNEVLIEMKCSWREGALLEIMEAVSSLHLDFLSVQSSKADGNLHLTIKSKFRGSTPVSAKKIKQALHEVACKC 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02128 610 Pfam Helix-loop-helix DNA-binding domain 413 459 IPR011598 GO:0046983
Bva11g02128 610 Coils Coil 448 475 - -
Bva11g02128 610 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 409 458 IPR011598 GO:0046983
Bva11g02128 610 PANTHER TRANSCRIPTION FACTOR EGL1 3 605 - -
Bva11g02128 610 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 411 474 IPR036638 GO:0046983
Bva11g02128 610 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 189 IPR025610 -
Bva11g02128 610 SMART finulus 415 464 IPR011598 GO:0046983
Bva11g02128 610 Gene3D - 407 476 IPR036638 GO:0046983
Bva11g02128 610 PANTHER TRANSCRIPTION FACTOR TT8 3 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02128 Bva-Chr11 17577132 17581148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02128 2 610 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 51.306 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva11g02128 bHLH-MYC_N 2.4e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02128 - - gmx:100808167 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02128 11 17577132 17581148 Bva11g02128 11 17577132 17581148 ECH