Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02115 ATGGATGGGAGAGAAGCCATGGCATTCTCCGGTGGCTCTGCTTCATATTACATACATAGGGGAGGAATTGCTGGGTCTGGCTCTGGCTCTGGAACACAAGTAGGGGGTTTCCAGTCTCCCCCTGGGTTCAGACCTCTGTCCAACGCTGTCGTTCCGGCTCAGTCAAATATACGGGGTGGCTCCGTTGGCTCTACATTTTCAGTGGAGCCTCCACGTGCCAATTTTAGTCATGGCATTAGCATGGGTGCCACTCCCGGCGTACCTTCAAGCGAAcctgtgaaaaagaaaagagggaggCCTCGTAAGTACGGTCCTGATGGACCAGTTTCTTTGGGACTGTCTCCAATGTCCATCAATGCTAATTCTACTCCAGGTTCAAGCACACCATCCAACAAAAGGAGTAGAGGGCGTCCACCTGGAAGTGGAAGGAAGCAACAGTTAGCTACTCTGGGTGAATGGATGAACAATTCAGCAGGACTGGCTTTTTCACCTCATGTTATCACCGTTGGAGTAGGAGAGGACGTCGTAGCAAAGTTATTGTCAGTATCACAGGAAAGACCACGGGCACTGTGCATCTTGTCAGGCACTGGAACAGTTTCTTCAGTTTCACTACGACAGCCTGCTTCTACTGGTGTCAGTGTCACTTATGAGGGCcgatttgaaatattatgcTTGTCTGGTTCCTACTTGGTTGCTGAGGACGGTGGACCACGTGACAGAACAGGTGGTGTGAGCGTTTCCCTTTCTAGTCCTGATGGTCATGTCATTGGTGGTGGTGTTGCTGTGCTCATTGCTGCAAGTCCAGTACAGGTGGTTGTGTGCAGTTTTGTATATGGAGGAGGCTCAAAGACCAAGACTAAGCAAGTGATGGCTCCAAAAGATGATGACAGTTCTAAGCCACCGCATGTTGATAAGTTATCTGCTCCAGCCAGTGCCCCGCCCTCCCAAAATTATACCCCTTCTGCAACAGGTGTTTGGCTTGGATCACGCACCCACACTGGTATTGACTTGACGCGCggatg 1022 0.4853 MDGREAMAFSGGSASYYIHRGGIAGSGSGSGTQVGGFQSPPGFRPLSNAVVPAQSNIRGGSVGSTFSVEPPRANFSHGISMGATPGVPSSEPVKKKRGRPRKYGPDGPVSLGLSPMSINANSTPGSSTPSNKRSRGRPPGSGRKQQLATLGEWMNNSAGLAFSPHVITVGVGEDVVAKLLSVSQERPRALCILSGTGTVSSVSLRQPASTGVSVTYEGRFEILCLSGSYLVAEDGGPRDRTGGVSVSLSSPDGHVIGGGVAVLIAASPVQVVVCSFVYGGGSKTKTKQVMAPKDDDSSKPPHVDKLSAPASAPPSQNYTPSATGVWLGSRTHTGIDLTRG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02115 340 SUPERFAMILY AF0104/ALDC/Ptd012-like 162 278 - -
Bva11g02115 340 ProSiteProfiles PPC domain profile profile. 159 302 IPR005175 -
Bva11g02115 340 MobiDBLite consensus disorder prediction 22 145 - -
Bva11g02115 340 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 326 - -
Bva11g02115 340 MobiDBLite consensus disorder prediction 49 71 - -
Bva11g02115 340 MobiDBLite consensus disorder prediction 288 302 - -
Bva11g02115 340 CDD DUF296 164 276 IPR005175 -
Bva11g02115 340 Gene3D - 164 290 - -
Bva11g02115 340 MobiDBLite consensus disorder prediction 310 328 - -
Bva11g02115 340 MobiDBLite consensus disorder prediction 114 135 - -
Bva11g02115 340 MobiDBLite consensus disorder prediction 284 340 - -
Bva11g02115 340 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 277 IPR005175 -
Bva11g02115 340 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 326 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02115 Bva-Chr11 17503265 17507191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02115 1 340 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 51.175 1.14e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02115 - - zju:107429897 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02115 11 17503265 17507191 Bva11g02115 11 17503265 17507191 ECH