Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02109 ATGACGAAAACGTTCTTTGCCTTAAGCTGCCTCCGAAATGAGGATTGGGGTAGGCTGTCTCCGCGGCCACGTTACCCGTCGATGCTCAGGTACCCTAAGGGTATGTCGGCGGAAGGAAGCAGCGTGGAGGGCTCAGAGGCCAATGCGCTGTTCTCGGTCGTCGGAATGACTTGCTCTGCTTGCGCTGGATCCGTCGAGAAAGCCATCAAGCGCCTTCCAGGAATTCGTGAAGCCGCCGTTGATGTTCTGAACAACAGATCCCAAGTCTTCTTCTACCCTTCCTTCGTTAACgagGAAACCATTCGTCAAGCTATTGAAGAAGATGCAGGCTTTGAAGCCACATTGCTTACAGATGAAACGAATGAGAGATCTGTTCAAATATGCCGCATACGCATAAAAGGAATGACTTGCACTTCATGCTCCTCCACTGTTGAATCAGCTTTGCAAGCAGTTCAAGGTGTGATAAAGGCCCAAGTGGCCTTGGCAACTGAAGAAGCAGAAGTATACTACAGtccaaatattattaactacaACCAGATATTGGAAGCCATAGAAGACACTGGATTTGAAGCCACACTTCTTAGTTCAGGTGAAGACATGAGCAAGATAGACCTTAAGGTTGATGGTGTCCGGACTGATCGTTCCATGAGACTGATTGAGACTTCTCTTCAGGCACTCCCAGGGGTCCAAAGTATTAAAGTGTATGCTGAACTCAACAAAATATCGCTTTCTTATAAACCTGATATGACAGGACCAAGGGATTTCATTAATGTGATTGAGGAAACTCGGTCTAGGCGTTTCAAAGCAAAAATATTTCCTGAAGAAGGACGAAGAGATACTCATAGAAGCGAGGAAATTAagcaatattatatatccttCTTATGGAGTTTGGTTTTCACTATTCCTGTCTTTCTTACCTCTATGGTCCTGATGTATATCCCTAGAACTAAGCATTTGCTGGATACCAACGTTGTCAATATGCTTACTGTGGGGGAGATCTTAAGATGGGTGCTTGCCACACCAGTACAGTTCATTATAGGCCGGCGATTCTACTCTGGTTCCTACAAAGCCTTACGCCATGGCTCTGCTAATATGGATGTTTTGATTGCCTTGGGAACAAATGCAGCATACTTCTATTCAGTGTACTCTGTCCTGAGAGCTGCTACCTCTCCAGACTTCAAGGGTGCAGATTTCTTTGAGACTAGCGCTATGcttatttcatttatcttGCTTGGAAAGTATCTGGAAGTCTTAGCCAAGGGGAAGACATCCAATGCAATTGCCAAGCTTATGAACCTGACCCCCGAGACAGCTATATTGTTAACCTTGGACAATGAAGGAAATATTATTAGTGAACAAGAAATTGACAGCCGATTGATACAAAAGACTGATGTGATTAAAGTTATTCCTGGTGCAAAAGTTGCTTCAGATGGTTTAGTCATTTGGGGCCAGAGCCACGTGAATGAGAGCATGATAACAGGAGAGGCACGTCCTGTGGCAAAGAGGAAGGGAGACACCGTTATAGGAGGAACTGTAAATCAGAATGGAGTGTTGCATGTCAAGGCAACACGGGTTGGATCAGAGAGTGCTCTTTCTCAGATTGTTCGACTTGTAGAGTCAGCACAGTTGGCCAAGGCTCCTGTGCAGAAGTTTGCTGACCGTATTTCAAAATACTTTGTACCCCTGGTCATTTTCATCTCAGTTTTAACATGGCTCGCCTGGTTTTTAGCTGGGAGATTTCATTCTTATCCAAAGTCTTGGATACCATCTTCCATGGACAGCTTTGAGCTTGCTTTGCAGTTTGGGATTTCTGTCATGGTCATAGCCTGTCCTTGTGCTTTAGGTCTCGCAACCCCGACTGCTGTTATGGTTGGCACTGGTGTTGGTGCGTCTCAAGGAGTACTGATCAAAGGAGGGCAAGCATTAGAAAGTGCACATAAGGTGGACTGCATTGTTTTTGACAAGACAGGTACTCTCACCATTGGGAAGCCTGTGGTTGTAAGCACAAAACTACTGACGAATATGTTACTCCAGGATTTCTATGAATTTGTTGCTGCGGCTGAGGTGAATAGCGAGCATCCACTAGCCAAGGCCATAGTCGAGTACGCCAAAAAATTCAGAGATGAGGAGAACCCTCTCTGGCCAGAAGCACGGGATTTTGTCTCCATTACGGGCCATGGAGTGAAGGCCACTGTCCGGAATAAGGAAATAATTGTGGGTAACAAGAGCTTCTTGTCTGAACACAATGTTGCAATTCCTGCTGATGCTGAAGATATACTGGCAGAGGCTGAGGGAATGGCTCAAACTGGAATTATGGTATCCATAAATGGGGAGGTAACTGGGATTTTAGCAGTATCTGACCCATTAAAACAAGGTGCTCAAGAAGTCATTTCCATTCTCAAATCTATGAATATTAGGAGCATCATGGTGACTGGTGATAACTGGGGGACTGCTAATTCTATATCTAGGGAAGTTGGAATTGAAGCTGTTATTGCTGAGGCCAAACCAGAGCAGAAAGCAGAGCAAGTGAAGGATTTGCAGAGTTCTGGGCATACGGTGGCAATGGTGGGGGACGGTATCAATGATTCACCAGCACTTGTGGCAGCTGACGTGGGAATGGCAATTGGTGCAGGGACAGACATTGCTATTGAGGCAGCTGATATTGTTCTCATGAAGAGCAACTTGGAGGATGTGATAACTGCCATTGACCTTTCCAGAAAAACATTCTCTCGTATCCGTCTAAATTACTTCTGGGCTTTGGGTTATAATCTGCTTGGCATTCCAATTGCTGCTGGTGCACTTTTTCCTTCTACAGGATTTCGATTGCCACCATGGATTGCTGGGGCTGCAATGGCATCCTCTTCTGTCAGTGTTGTTTGCTGTTCTCTCCTGTTGAAATATTACAAGAGACCCAAGAAGCTGGACAACCTTGAGATACGGGGCATAAAGGTTGAGTG 2957 0.4474 MTKTFFALSCLRNEDWGRLSPRPRYPSMLRYPKGMSAEGSSVEGSEANALFSVVGMTCSACAGSVEKAIKRLPGIREAAVDVLNNRSQVFFYPSFVNEETIRQAIEEDAGFEATLLTDETNERSVQICRIRIKGMTCTSCSSTVESALQAVQGVIKAQVALATEEAEVYYSPNIINYNQILEAIEDTGFEATLLSSGEDMSKIDLKVDGVRTDRSMRLIETSLQALPGVQSIKVYAELNKISLSYKPDMTGPRDFINVIEETRSRRFKAKIFPEEGRRDTHRSEEIKQYYISFLWSLVFTIPVFLTSMVLMYIPRTKHLLDTNVVNMLTVGEILRWVLATPVQFIIGRRFYSGSYKALRHGSANMDVLIALGTNAAYFYSVYSVLRAATSPDFKGADFFETSAMLISFILLGKYLEVLAKGKTSNAIAKLMNLTPETAILLTLDNEGNIISEQEIDSRLIQKTDVIKVIPGAKVASDGLVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNQNGVLHVKATRVGSESALSQIVRLVESAQLAKAPVQKFADRISKYFVPLVIFISVLTWLAWFLAGRFHSYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVDCIVFDKTGTLTIGKPVVVSTKLLTNMLLQDFYEFVAAAEVNSEHPLAKAIVEYAKKFRDEENPLWPEARDFVSITGHGVKATVRNKEIIVGNKSFLSEHNVAIPADAEDILAEAEGMAQTGIMVSINGEVTGILAVSDPLKQGAQEVISILKSMNIRSIMVTGDNWGTANSISREVGIEAVIAEAKPEQKAEQVKDLQSSGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYFWALGYNLLGIPIAAGALFPSTGFRLPPWIAGAAMASSSVSVVCCSLLLKYYKRPKKLDNLEIRGIKVE 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02109 985 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 365 965 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva11g02109 985 Pfam E1-E2 ATPase 435 630 - -
Bva11g02109 985 SFLD Haloacid Dehalogenase 634 908 - -
Bva11g02109 985 ProSiteProfiles Heavy-metal-associated domain profile. 202 261 IPR006121 GO:0046872
Bva11g02109 985 Pfam Heavy-metal-associated domain 51 112 IPR006121 GO:0046872
Bva11g02109 985 Pfam Heavy-metal-associated domain 130 190 IPR006121 GO:0046872
Bva11g02109 985 PRINTS Copper-transporting ATPase 1 signature 150 171 - -
Bva11g02109 985 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Bva11g02109 985 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Bva11g02109 985 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 7 976 - -
Bva11g02109 985 SUPERFAMILY Calcium ATPase, transduction domain A 452 538 IPR008250 -
Bva11g02109 985 TIGRFAM TIGR00003: copper ion binding protein 51 113 IPR006122 GO:0005507
Bva11g02109 985 TIGRFAM TIGR00003: copper ion binding protein 130 191 IPR006122 GO:0005507
Bva11g02109 985 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Bva11g02109 985 PRINTS P-type cation-transporting ATPase superfamily signature 879 891 - -
Bva11g02109 985 PRINTS P-type cation-transporting ATPase superfamily signature 781 792 - -
Bva11g02109 985 PRINTS P-type cation-transporting ATPase superfamily signature 652 666 - -
Bva11g02109 985 PRINTS P-type cation-transporting ATPase superfamily signature 803 813 - -
Bva11g02109 985 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Bva11g02109 985 Gene3D - 43 115 - -
Bva11g02109 985 PANTHER ATP7, ISOFORM B 7 976 - -
Bva11g02109 985 Gene3D - 202 271 - -
Bva11g02109 985 CDD HMA 51 114 IPR006121 GO:0046872
Bva11g02109 985 CDD P-type_ATPase_Cu-like 293 952 - -
Bva11g02109 985 SUPERFAMILY HAD-like 651 962 IPR036412 -
Bva11g02109 985 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 405 939 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva11g02109 985 ProSiteProfiles Heavy-metal-associated domain profile. 48 107 IPR006121 GO:0046872
Bva11g02109 985 SUPERFAMILY HMA, heavy metal-associated domain 124 196 IPR036163 GO:0046872
Bva11g02109 985 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872
Bva11g02109 985 Gene3D - 126 198 - -
Bva11g02109 985 ProSiteProfiles Heavy-metal-associated domain profile. 127 193 IPR006121 GO:0046872
Bva11g02109 985 ProSitePatterns E1-E2 ATPases phosphorylation site. 654 660 IPR018303 -
Bva11g02109 985 SUPERFAMILY HMA, heavy metal-associated domain 47 118 IPR036163 GO:0046872
Bva11g02109 985 Pfam haloacid dehalogenase-like hydrolase 648 870 - -
Bva11g02109 985 Gene3D - 737 787 IPR023299 GO:0000166
Bva11g02109 985 Gene3D - 659 736 IPR023299 GO:0000166
Bva11g02109 985 ProSitePatterns Heavy-metal-associated domain. 132 161 IPR017969 GO:0046872
Bva11g02109 985 SUPERFAMILY Calcium ATPase, transmembrane domain M 400 926 IPR023298 -
Bva11g02109 985 Gene3D - 420 542 - -
Bva11g02109 985 SUPERFAMILY HMA, heavy metal-associated domain 196 262 IPR036163 GO:0046872
Bva11g02109 985 CDD HMA 130 192 IPR006121 GO:0046872
Bva11g02109 985 SFLD p-type atpase 634 908 IPR044492 -
Bva11g02109 985 Gene3D - 619 913 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02109 Bva-Chr11 17484490 17489755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02109 1 985 Primary Pumps ATPases AT1G63440 75.654 0.0 1532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02109 K17686 - gmx:100810141 1613.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02109 11 17484490 17489755 Bva11g02109 11 17484490 17489755 ECH