Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02106 ATGAAGTTATATACTTCATTATTCTTTCTCGGTCTGATTTCCACGGTCTTCTTTGTCACTTGTGCTTCCGTGCGATCAAATGAAGTTTGGGCGCTCACGACCTTCAAAGAAGCCGTGTATGAAGACCCACATCTTGTTTTGTCCAGTTGGAACACGCTGGATTCAGATCCTTGTGACTGGTTTGGCGTTTCATGCAGTACAGCTCGAGATCATGTTGTTAAGCTAAACATTTCAGGGTCATCTTTAAGGGGATTTCTTGCGCCAGAATTGGGACAAATTACCTACTTGGAACAACTGATCTTGCATGGTAACAATCTGATTGGAATAATACCAAAAGAATTGGGCAAGATGAAATCTCTCAAGGTTTTGGATTTGGGGATGAATCAGTTATCAGGACCAATTCCTCCTGAGATTGGGAATTTGACCCAAATTGTGAAAATaaACCTGCAGTTCAATGGGTTGACCGGTACGCTACCCTCAGAACTTGGAAATCTGAAATACCTTCAAGAACTTCGGCTGGATAGGAATAAGCTTCATGGAGCTGTTCCTGCTAGTGGcagttcaaatttttcttcaaatatgcATGAAATGTATGCATCAAATGCGAATTTAACTGGCTTCTGTCGTTCATCTCAGTTAAAAGTTGCAGATTTTTCATATAACTTCTTTGTTGGGAGCATACCCAAATGCTTAGAATATCTTCCAAGGACAAGCTTTCAAGGGAACTGCCTCCAAAGCAAAGAATTGAAGCAGCGTCCTTCCGTGCAGTGTAGTATGCATGCCGGTGCTCCTCCTCCGAAGAGCCATTCCGGGGTCTACCCAAAGCACCGACCTGCTGAGGATGCATCAAAGCATCAAGGGGCATCAAAGCCTGCTTGGCTTTTGGTTCTAGAGGTAGCTACAGGAACCATGGTCGGTTCTATCTTTCTGGTTGGTGTCCTAACTGCACTTCAGAGATGTAATAAGAAATCATCCATTATTATTCCTTGGAAGAAATCTGCAAGCGAGAAGGACCATATGACAGTATACATAGACTCAGACATGTTGAAGGATGTAATGAGATATAGCAGACAGGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATCATCGGCTCCACACCAAACAGTGTGGTCTACAAGGGCACCACAGAAGGTGGGCCTGAGATTGCTGTAATTTCCCTTTGCACCAAGGAGCAGTATTGGACAGGATATCTTGAGCTCTATTTTCAGAGAGagGTGGCAGAGTTGGCAAGGTTAAATCATGAGAATACAGGAAAACTACTAGGCTATTGTAAAGAGAGCGCTCCATTTACAAGGATGCTGGTTTTTGAGTACGCTTCAAATGGGACGCTTCATGAACATTTACATTATGGAGAAGAATGCCAATTATCTTGGACTAGGCGtatgaaaattgtaattgGCATTGCACGTGGACTCAAGTATCTGCACACAGAAGTTGAGCCTCCATTCTCTATTTCAGAACTGAACTCTAGTGCTGTATACCTGACAGAAGATTTTCTCCCTAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGGTCAGCAAAGAATTCTGGTTCTGTTGGCAGCCAAGGTGCTGTTTGTGTTCTTCCAAATTCTCTAGAGGCACGCCATCTTGATATCAAAGGCAATGTGTACGCTTTTGGCGTACTTCTACTGGAGATTATCAGTGGGAGACCTCCATACTCCAAGGACAAAGGTAGCTTGGTGGATTGGGCAGGGGACTACCTTGAAATGCCAGAAGTAATGTCGTATATGGTTGATCCCGAATTGAAACATTTTAGATATGACGACCTGAAAGTAATATGTGAGACCGTAAATCTTTGTATCAATCCTGACCCTGACAAGCGTCCGTCAATGCAAGAACTATGTAGCATGCTGGAGAGCAGAATTGACACATCTATAAACGTGGAGCTCAAAGCATCATCTTTGGCATGGGCTGAGCTTGCACTTTCATCATA 1991 0.4259 MKLYTSLFFLGLISTVFFVTCASVRSNEVWALTTFKEAVYEDPHLVLSSWNTLDSDPCDWFGVSCSTARDHVVKLNISGSSLRGFLAPELGQITYLEQLILHGNNLIGIIPKELGKMKSLKVLDLGMNQLSGPIPPEIGNLTQIVKINLQFNGLTGTLPSELGNLKYLQELRLDRNKLHGAVPASGSSNFSSNMHEMYASNANLTGFCRSSQLKVADFSYNFFVGSIPKCLEYLPRTSFQGNCLQSKELKQRPSVQCSMHAGAPPPKSHSGVYPKHRPAEDASKHQGASKPAWLLVLEVATGTMVGSIFLVGVLTALQRCNKKSSIIIPWKKSASEKDHMTVYIDSDMLKDVMRYSRQELEVACEDFSNIIGSTPNSVVYKGTTEGGPEIAVISLCTKEQYWTGYLELYFQREVAELARLNHENTGKLLGYCKESAPFTRMLVFEYASNGTLHEHLHYGEECQLSWTRRMKIVIGIARGLKYLHTEVEPPFSISELNSSAVYLTEDFLPKLVDFESWKTILERSAKNSGSVGSQGAVCVLPNSLEARHLDIKGNVYAFGVLLLEIISGRPPYSKDKGSLVDWAGDYLEMPEVMSYMVDPELKHFRYDDLKVICETVNLCINPDPDKRPSMQELCSMLESRIDTSINVELKASSLAWAELALSS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02106 663 PANTHER PROTEIN MALE DISCOVERER 2 7 663 - -
Bva11g02106 663 SUPERFAMILY Protein kinase-like (PK-like) 342 638 IPR011009 -
Bva11g02106 663 ProSiteProfiles Protein kinase domain profile. 365 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g02106 663 MobiDBLite consensus disorder prediction 254 285 - -
Bva11g02106 663 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Bva11g02106 663 Gene3D Phosphorylase Kinase; domain 1 329 446 - -
Bva11g02106 663 Gene3D Ribonuclease Inhibitor 141 260 IPR032675 -
Bva11g02106 663 SUPERFAMILY L domain-like 26 235 - -
Bva11g02106 663 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Bva11g02106 663 Gene3D Transferase(Phosphotransferase) domain 1 447 653 - -
Bva11g02106 663 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 663 - -
Bva11g02106 663 Pfam Protein tyrosine and serine/threonine kinase 368 637 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02106 Bva-Chr11 17472616 17477516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02106 41 642 Receptor kinase-like Gene Family AT5G45780 29.967 2.23e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Bva11g02106 PK_Tyr_Ser-Thr 1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02106 - - pvy:116137158 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02106 11 17472616 17477516 Bva11g02106 11 17472616 17477516 ECH