Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02085 ATGGCTTCCTCTTCGTCAAATAGCATCAGTAGCAATAGCTATGACATTCCTTGGGTAGAGAAGTACCGACCCAACAAGGTCGCGGACATCGTTGGCAACGAGGACGCCGTCTCCAGGCTTCAAGTCATCGCCCGCGACGGCAATATGCCAAACCTAATACTGTCTGGTCCTCCTGGAACTGGTAAAACTACTAGTATACTGGCTCTTGCGCATGAACTTCTGGGACCTAATTACAAGGAAGCTGTTCTGGAGCTGAATGCATCGGATGATAGAGGAATAGATGTTGTCAGGAATAAGATCAAAATGTTTGCACAAAAGAAAGTAACACTGCCTCCTGGACAACACAAAATAGTAATACTGGATGAAGCTGACAGCATGACTTCAGGAGCTCAACAAGCAATGAGAAGGACAATGGAAATATATTCAAACTCCACTCGTTTTGCTCTTGCATGCAATACATCGTCTAAAATTATTGAGCCAATCCAGAGCAGATGTGCCATTGTGAGATTTTCAAGACTAACTGATCAAGAGATACTCGATCGCCTCAGGGTAGTGGTAGACACTGAAAAGGTTCCATATGTTCCAGAAGGCCTTGAAGCCATAATTTTCACTGCTGATGGTGATATGAGGCAGGCATTGAACAACTTGCAAGCAACATATTGTGGGTTTCGATTTGTAAACCAAGAAAACGTTTTTAAgGTTTGTGACCAGCCGCATCCATTGCATGTGAAGAATATGGTGCGTAATGTTATTGAAGGAAAATTTGATGAGGCTTGTTTGGGACTCAAACAACTGTATGATCTGGGTTATTCCCCCACAGATATAATCACAACGCTCTTTCGTATAATAAAGAATTATGATATGGCTGAGTACCTGAAGCTGGAATTCATGAAGGAAACTGGGTTTGCTCATATGAGAATTTGCGATGGAGTTGGTACTTATCTTCAGTTGTGTGGTTTATTGGCTAAGCTTTCTTTAACTCGAGAAACTGCTAAAGCTGCAGCTGCATG 1010 0.4248 MASSSSNSISSNSYDIPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEADSMTSGAQQAMRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILDRLRVVVDTEKVPYVPEGLEAIIFTADGDMRQALNNLQATYCGFRFVNQENVFKVCDQPHPLHVKNMVRNVIEGKFDEACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGTYLQLCGLLAKLSLTRETAKAAAA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02085 336 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 7 333 - -
Bva11g02085 336 SUPERFAMILY post-AAA+ oligomerization domain-like 237 328 IPR008921 GO:0003677|GO:0006260
Bva11g02085 336 Pfam ATPase family associated with various cellular activities (AAA) 52 170 IPR003959 GO:0005524|GO:0016887
Bva11g02085 336 Gene3D - 10 173 IPR027417 -
Bva11g02085 336 SMART AAA_5 48 180 IPR003593 -
Bva11g02085 336 Gene3D - 174 237 - -
Bva11g02085 336 CDD HLD_clamp_RFC 173 235 - -
Bva11g02085 336 Pfam Replication factor C C-terminal domain 238 323 IPR013748 -
Bva11g02085 336 Gene3D - 238 329 - -
Bva11g02085 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 236 IPR027417 -
Bva11g02085 336 CDD AAA 31 168 - -
Bva11g02085 336 PANTHER REPLICATION FACTOR C SUBUNIT 2 7 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02085 Bva-Chr11 17383270 17386571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02085 12 333 Core DNA Replication Machinery Family AT1G63160 90.683 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02085 K10755 - qsu:111999495 613.994