Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02084 ATGGGTAAGGCAGCAAAATGGTTCCGCAGTTTTCTCGGCTTAAAGAGCTCTGActcctcttcttctcccaAACCTCCCAAAGAGAGACGCAGATGGAGCTTCGTCAAATCATACAGAGAGAAAGACCTTCGCCGTCCCACCACTACCAAACCCACCGATCACCACACCATTTACGTGGCCCCGCAACACGAGCCCGGCTTGGATCCTGATAAACACGCAATCGCAGTAGCTGCTGCCACTGCTGCTGTGGCGGAGGCGGCCGTTGCTGCTGCTCAGGCGGCAGCTGCTGTTGTAAGGCTAACAAGCAGTGGCCATGGTGCCGGTAACGCCGCGGTGACGGCTCGAAATAACTCTGCGGCCACGGCAATTCGCGAACAATGGGCGGCTATTAAGATTCAAGCCGCTTTTCGAGGCTTCTTGGCCAGGAAAGCACTGCGAGCATTAAAAGGATTGGTGAAACTCCAGGCATTGGTTAGAGGTCACATTGACAGGAAGCGAACAGCAGAGTGGGTGCAAAGGATGCAAGTGTTCTTACGAACACAGGCACGGGCTCGTGTGGGACGTGCCCAAGTTTTGCAGACTTCGTATTCAAATGCTAAACAATCGAATTCTCAACCCACTGGCCCTGCAACACCAGACAAATTCGAGAGTCCAGTTAGATCCAAGAGCTTGAAACATGATCAGTCATTGGTGGTCAAGagAAATGGCATAAAATCCAATGTCCAGATCAGTGGCATTCAAGAGGGATGGAATAGATCAGAGAGTCGGGTAGATGAACAATCACGGAATGGACTGAGATCAAGAACTTGTAGTGTAGACGATGAGAAAAGCGTGAGGGTGCTTGAAATAGACTCTGGAAAACCTTACCTGAGAGAAAATCGCCGAAACTTGTTCCACTCTGCTCattattcttctctttctgaTCAATATGGTCAATGTTTTACAAATTGTCAATCGGGTCATAGTTTATCTTGTTGTGAGTGTGAAGTTCAATCTTACAGCCCACAAAAGATTGACGAGGTTGAGGAGAGCCCATTCCGCACTGCGGACAGTAGTCCTCAATTCTGTTCTGCCTCCTCCTCTAGGGACGGTGGCTGCGGCGGTGGCTCCAAGACAAGTCCCTTCACTCCTAGCCGGAGTGATGGTTCAAGAAGTGGTTACTCAGACTACCCTAGTTACATGGCTTACACCGAATCTTCAAAGGCAAAGGTGAGATCCCTGAGTGCTCCAAAGCAAAGGCCCTCGTCTAGTTCATCATCTAATAGGGACTCTGGGGACTCGAGATTGGCTGCGCAGAGAGCATCTGTGATGCATGCAAGCTTCACAAGCAAAGCCTATCCAGGTTCTGGTCGTTTGGATAAACTTGGTATGCCAGTGGGTTACAGATTCTG 1391 0.4874 MGKAAKWFRSFLGLKSSDSSSSPKPPKERRRWSFVKSYREKDLRRPTTTKPTDHHTIYVAPQHEPGLDPDKHAIAVAAATAAVAEAAVAAAQAAAAVVRLTSSGHGAGNAAVTARNNSAATAIREQWAAIKIQAAFRGFLARKALRALKGLVKLQALVRGHIDRKRTAEWVQRMQVFLRTQARARVGRAQVLQTSYSNAKQSNSQPTGPATPDKFESPVRSKSLKHDQSLVVKRNGIKSNVQISGIQEGWNRSESRVDEQSRNGLRSRTCSVDDEKSVRVLEIDSGKPYLRENRRNLFHSAHYSSLSDQYGQCFTNCQSGHSLSCCECEVQSYSPQKIDEVEESPFRTADSSPQFCSASSSRDGGCGGGSKTSPFTPSRSDGSRSGYSDYPSYMAYTESSKAKVRSLSAPKQRPSSSSSSNRDSGDSRLAAQRASVMHASFTSKAYPGSGRLDKLGMPVGYRF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02084 463 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
Bva11g02084 463 Pfam Protein of unknown function (DUF4005) 363 443 IPR025064 -
Bva11g02084 463 SMART iq_5 124 146 IPR000048 GO:0005515
Bva11g02084 463 SMART iq_5 147 168 IPR000048 GO:0005515
Bva11g02084 463 Pfam IQ calmodulin-binding motif 127 146 IPR000048 GO:0005515
Bva11g02084 463 Pfam IQ calmodulin-binding motif 152 166 IPR000048 GO:0005515
Bva11g02084 463 MobiDBLite consensus disorder prediction 194 225 - -
Bva11g02084 463 PANTHER IQ-DOMAIN 5-RELATED 1 458 - -
Bva11g02084 463 Gene3D - 122 176 - -
Bva11g02084 463 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 458 - -
Bva11g02084 463 ProSiteProfiles IQ motif profile. 149 175 IPR000048 GO:0005515
Bva11g02084 463 MobiDBLite consensus disorder prediction 401 434 - -
Bva11g02084 463 MobiDBLite consensus disorder prediction 14 53 - -
Bva11g02084 463 MobiDBLite consensus disorder prediction 341 387 - -
Bva11g02084 463 MobiDBLite consensus disorder prediction 22 51 - -
Bva11g02084 463 MobiDBLite consensus disorder prediction 347 387 - -
Bva11g02084 463 MobiDBLite consensus disorder prediction 401 428 - -
Bva11g02084 463 MobiDBLite consensus disorder prediction 194 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02084 Bva-Chr11 17379556 17382760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02084 1 463 IQD Protein Family AT4G23060 40.381 8.19e-68 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02084 - - qsu:111999477 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02084 11 17379556 17382760 Bva08g00205 08 991274 994880 BWGD