Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02083 ATGGCTCATTCTTTTTTCGGTGAAACTCTATCTTTTGGAGGCTCAAGCCATGGACAGGGTCAACAAGCTGTGCCCTTTCCTACGACTACGAGTTCCTTAAGAATTTTGCTCTTACATGGCAACTTAGAGATATACGTCAAAGAGGCCAAAAGCCTTCCTAACATGGATATGTTTCACAAGACCATGAGGATATGTACTGTAATTGCGAGGACATTTGTGATCAGAAATGATGAGAACCCTGTCTGGATGCAGCATTTTAATGTTCCTGTTGCGCATTATGCTTCGGAAGTTCACTTTGTTGTGAAAGATGATGATGTAGTGGGCTCTCAGATTATTGGTACTGCTGGAGCAGTTTTGAGTTTATCCATTCAATATACGCCATATGATAAACTGGCTCTTTACCATCATGGAGTAGGTGGAGGTCCTGAACATGAAGGGGTCCCTGGTACATACTTTCCCCTTAGGAAAGGAGGCAAATTCAAACTTTATCAAGATGCTCATGCTCCCCAAGGTTGCCTCGCCAATTTGAAGATTGATGGTGATTTAAATTATGAGCATGGCAATTGTTGGCACGACATCTTTGATGCTATAAGTCAGGCCggcaaattaatatatatcgtAGGGTGGTCTGTGTACTACAATGTTAAACTGATTCGCGATGGCAATGATGAAAAATCTTGCACTTTAAGTGATCTCCTCAAGACTAAATCCCAGGAAGGTGTGAGAGTCCTGCTTCTTGTATGGGATGATCCTACATCTCGAAGCATCCTTGGATATAAAACGGAGGGACTTATGAACACTCATGATGAGGACACTCGTCGTTTTTTCAAGCACTCTTCCGTACGAGTCCTACTTTGCCCACGAACTGGTGGAAAAGGACATAGTTGGATCAAGAAGCAGGAAGCTGGAACAATCTATACCCATCATCAGAAAACAGTCATTGTGGATGCGAATGCAggtcaaaataaaagaaagattacAGCTTTCGTTGGAGGTCTTGATTTATGCATGGGGCGATATGATACACCACATCATTCTCTCTTTAGGACTTTGCATACAGCACACAAAGAGGACTATCATAACCCTAACTTCACGGGGCCTGTGGATGGTTGTCCAAGACAACCATGGCATGATTTGCATTCCCAAATTGATGGTCCAGCTGCATATGACATCCTCACCAACTTTGAGGAACGTTGGTCAAGGGCATCAAAGGTGTCTGGACTTCAGAAGATGAAAAGTTCATATGATGATTCATTACTGAATATAAGTAGAATTCCTGACATCATCGGTATTACTGATGTTCCTTCCTTAAATAAAGATAACCCAGATAATTGGCATGTCCAGaTCTTCCGTTCGATTGACTCCAATTCTGTCATAGGATTTCCGAAGGAACCAAAAGATGCTATAAAAAGGAACTTGGTTTGTGGGAAGAATGTACTGATAGACATGAGTATACATGCTGCATATGTCAAGGCAATCCGAGCCGCACaaaagttcatatatattGAGAACCAATACTTTCTTGGTTCGTCGTACAATTGGGATACTTACAAAAACTTAGGTGCAAACAACTTAATTCCGATGGAAATTGCTCTTAAAATTGctaacaaaatcaaacaaaatgagaGGTTCGCTGTGTACATTATCATCCCAATGTGGCCTGAAGGCGTACCCACAAGTACACCAACTCAACGGATTCTCTTTTGGCAGTTCACTTGCTGGTTGGTACGGAAATCGTCTTGGCAGCGGATGACCATGTTCGGATCAGCGCATCTCGAATGCCACGTGCCAGAATCATG 1799 0.4102 MAHSFFGETLSFGGSSHGQGQQAVPFPTTTSSLRILLLHGNLEIYVKEAKSLPNMDMFHKTMRICTVIARTFVIRNDENPVWMQHFNVPVAHYASEVHFVVKDDDVVGSQIIGTAGAVLSLSIQYTPYDKLALYHHGVGGGPEHEGVPGTYFPLRKGGKFKLYQDAHAPQGCLANLKIDGDLNYEHGNCWHDIFDAISQAGKLIYIVGWSVYYNVKLIRDGNDEKSCTLSDLLKTKSQEGVRVLLLVWDDPTSRSILGYKTEGLMNTHDEDTRRFFKHSSVRVLLCPRTGGKGHSWIKKQEAGTIYTHHQKTVIVDANAGQNKRKITAFVGGLDLCMGRYDTPHHSLFRTLHTAHKEDYHNPNFTGPVDGCPRQPWHDLHSQIDGPAAYDILTNFEERWSRASKVSGLQKMKSSYDDSLLNISRIPDIIGITDVPSLNKDNPDNWHVQIFRSIDSNSVIGFPKEPKDAIKRNLVCGKNVLIDMSIHAAYVKAIRAAQKFIYIENQYFLGSSYNWDTYKNLGANNLIPMEIALKIANKIKQNERFAVYIIIPMWPEGVPTSTPTQRILFWQFTCWLVRKSSWQRMTMFGSAHLECHVPES 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02083 599 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 7 62 - -
Bva11g02083 599 Gene3D Endonuclease Chain A 175 420 - -
Bva11g02083 599 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 120 IPR035892 -
Bva11g02083 599 Gene3D C2 domain 28 125 IPR035892 -
Bva11g02083 599 Pfam C2 domain 40 116 IPR000008 -
Bva11g02083 599 PANTHER PHOSPHOLIPASE D 115 572 IPR015679 -
Bva11g02083 599 SMART C2_3c 41 131 IPR000008 -
Bva11g02083 599 SUPERFAMILY Phospholipase D/nuclease 152 405 - -
Bva11g02083 599 ProSiteProfiles C2 domain profile. 21 132 IPR000008 -
Bva11g02083 599 Pfam Phospholipase D Active site motif 305 339 IPR001736 GO:0003824
Bva11g02083 599 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 304 339 IPR001736 GO:0003824
Bva11g02083 599 PANTHER PHOSPHOLIPASE D 66 115 IPR015679 -
Bva11g02083 599 Gene3D Endonuclease Chain A 450 566 - -
Bva11g02083 599 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 115 572 - -
Bva11g02083 599 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 66 115 - -
Bva11g02083 599 SUPERFAMILY Phospholipase D/nuclease 473 579 - -
Bva11g02083 599 PANTHER PHOSPHOLIPASE D 7 62 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02083 Bva-Chr11 17373649 17378082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02083 32 570 Phospholipase D Gene Family (Wang group) AT2G42010 66.499 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02083 K01115 - gmx:100786241 926.006